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Record W7083836982 · doi:10.5705/ss.202024.0346

Gaussian Variational Approximation with Composite Likelihood for Crossed Random Effect Models

2025· article· en· W7083836982 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueStatistica Sinica · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Mapping and Diversity in Plants and Animals
Canadian institutionsUniversity of Toronto
FundersNatural Sciences and Engineering Research Council of CanadaGovernment of Jiangsu Province
KeywordsGaussianComposite numberGaussian random fieldMaximum likelihoodGaussian processQuasi-maximum likelihood

Abstract

fetched live from OpenAlex

Composite likelihood usually ignores dependencies among response components, while variational approximation to likelihood ignores dependencies among parameter components.What both methods have in common is that they essentially break the dependence of random effects.In this paper, we derive a Gaussian variational approximation to the composite log-likelihood function for Poisson and Gamma models with crossed random effects.We present theoretical aspects of the estimates derived from this approximation and support these theories with simulation studies.Specifically, we show the estimates are consistent with a convergence rate m -1/2 +n -1/2 , where m and n denote the number of rows and columns, respectively.We further provide detailed asymptotic normality results under a new regime where log m/ log n for (1/2, 2).Additional simulation studies show that our method yields comparable estimation performance and is slightly faster than the Laplace approximation in the package glmmTMB and a Gaussian variational approximation to the full log-likelihood function.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.909
Threshold uncertainty score0.378

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.254
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it