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Turing patterns

2009· book-chapter· en· W801024947 on OpenAlexaff
Rashmi C. Desai, Raymond Kapral

Bibliographic record

VenueCambridge University Press eBooks · 2009
Typebook-chapter
Languageen
FieldComputer Science
TopicNonlinear Dynamics and Pattern Formation
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsTuringPattern formationHomogeneousMorphogenesisActivator (genetics)Mechanism (biology)PhysicsChemistryBiologyStatistical physicsComputer scienceBiochemistry

Abstract

fetched live from OpenAlex

A Turing pattern forms when a spatially homogeneous steady state, which is stable to small spatially homogeneous perturbations, loses its stability to small spatially inhomogeneous perturbations. The mechanism responsible for such instabilities was first described by Turing (1952), in his paper The chemical basis of morphogenesis , as a model for pattern formation in biology. The appearance ofTuring patterns relies on the interplay between autocatalytic chemical kinetics and diffusion. The basic Turing mechanism can be described in terms of the kinetics of two chemical species termed the activator and the inhibitor. The activator tends to increase the production of chemical species while the inhibitor tends to inhibit such concentration growth. A Turing pattern can form if the diffusion coefficient of the inhibitor is much greater than that of the activator. While there is still controversy over the role of Turing patterns in morphogenesis, these patterns have been unambiguously identified in chemically reacting media. The formation of a chemicalTuring pattern in a continuously fed unstirred reactor was reported by Castets et al . (1990). The chlorite–iodide–malonic acid system was studied in a thin gel reactor schematically depicted in Fig. 23.1. The top and bottom sides of the thin hydrogel in which the reaction takes place are in contact with reservoirs containing chemical reagents. The chemical species diffuse into the gel, and reaction takes place in a thin layer within the gel shown in the center panel of the figure. Within this reaction zone a stationary inhomogeneous periodic pattern of chemical concentrations develops, as seen in the right panel of the figure.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.026
Threshold uncertainty score0.088

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.002
Scholarly communication0.0030.003
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0260.012

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.186
Teacher spread0.169 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

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