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4,299,418 works, Canadian by any of four routes.

Every filter state is a URL; the URL is the query; the query is citable via /q/⟨hash⟩. The page, the API and the export parse the same parameters.

The current cohort, streamed from the database: every work column, the machine labels, the provisional scores, and the per-row validation status. Exports are capped at 100,000 rows. Mints a permanent /q/ link for this exact query. The same filters always produce the same link, whoever asks.

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Bioinformatics and Genomic Networks
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Direct Codex and Gemma labels are unvalidated and sparse. Distilled predictions cover the full frame and are also unvalidated. Choose the evidence source explicitly; absence of a direct label is never a negative label.

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The four routes compose: require the funder route and exclude affiliation to get the funder-only stratum no affiliation-based frame ever sees.

1,922 results · 1 filter active ·
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20002025
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Machine labels · sparse coverage
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An unlabeled work is unknown, not a negative. Label coverage is reported on every query.
1,922 works in the cohort · of 4,299,418page 2 of 39

Labels cover 6 of 1,922 works in this cohort. The rest are unlabeled, which is not a negative label: the label table is sparse today and grows as labeling rounds land.

Distilled predictions cover 1,922 of 1,922 works in this cohort. Predictions are machine_predicted_unvalidated. The Gemma side is a direct model label for every work (title-only); the Codex side is a distilled, calibrated classifier. Candidate is the union; consensus is the intersection.

affunlabeled
An in Vivo Map of the Yeast Protein Interactome
Kirill Tarassov, Vincent Messier, Christian R. Landry, Stevo Radinovic, Mercedes M. Serna Molina, Igor Shames +4 more
2008· article· en· Science· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
798
citations
afffundno abstractunlabeled
The BioPAX community standard for pathway data sharing
Emek Demir, Michael P. Cary, Suzanne Paley, Ken Fukuda, Christian Lemer, Imre Västrik +83 more
2010· article· en· Nature Biotechnology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · open_scienceconsensus · none
756
citations
afffundno abstractunlabeled
Systematic Discovery of In Vivo Phosphorylation Networks
Rune Linding, Lars Juhl Jensen, Gerard J. Ostheimer, Marcel A.T.M. van Vugt, Claus Jørgensen, Ioana Miron +15 more
2007· article· en· Cell· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
749
citations
afffundunlabeled
Cytoscape Web: an interactive web-based network browser
Christian Lopes, Max Franz, Farzana Kazi, Sylva L. Donaldson, Quaid Morris, Gary D. Bader
2010· article· en· Bioinformatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
746
citations
afffundunlabeled
Modeling interactome: scale-free or geometric?
Nataša Pržulj, Derek G. Corneil, Igor Jurišica
2004· article· en· Bioinformatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
712
citations
afffundunlabeled
The BioGRID Interaction Database: 2008 update
Bobby‐Joe Breitkreutz, C. Stark, Teresa Reguly, Lorrie Boucher, Ashton Breitkreutz, Michael Livstone +6 more
2007· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
701
citations
afffundno abstractunlabeled
Exploring genetic interactions and networks with yeast
Charles Boone, Howard Bussey, Brenda Andrews
2007· review· en· Nature Reviews Genetics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
674
citations
affunlabeled
clusterMaker: a multi-algorithm clustering plugin for Cytoscape
John H. Morris, Leonard Apeltsin, Aaron M. Newman, Jan Baumbach, Tobias Wittkop, Gang Su +2 more
2011· article· en· BMC Bioinformatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
669
citations
afffundunlabeled
Protein complex prediction via cost-based clustering
Andrew D. King, Nataša Pržulj, Igor Jurišica
2004· article· en· Bioinformatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
668
citations
affunlabeled
Online Predicted Human Interaction Database
Kevin R. Brown, Igor Jurišica
2005· article· en· Computer applications in the biosciences· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
620
citations
afffundunlabeled
Up-to-date catalogues of yeast protein complexes
Shuye Pu, Jessica Wong, Brian Turner, Emerson Cho, Shoshana J. Wodak
2008· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
616
citations
affno abstractunlabeled
Inconsistency in large pharmacogenomic studies
Benjamin Haibe‐Kains, Nehmé El-Hachem, Nicolai J. Birkbak, Andrew C. Jin, Andrew H. Beck, Hugo J.W.L. Aerts +1 more
2013· article· en· Nature· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · metaresearchconsensus · none
534
citations
afffundunlabeled
NetPath: a public resource of curated signal transduction pathways
Kumaran Kandasamy, S Sujatha Mohan, Rajesh Raju, Shivakumar Keerthikumar, Ghantasala S. Sameer Kumar, Abhilash K Venugopal +34 more
2010· article· en· Genome biology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
534
citations
afffundunlabeled
Osprey: a network visualization system
Bobby‐Joe Breitkreutz, Chris Stark, Mike Tyers
2003· article· en· Genome biology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
472
citations
afffundvenueunlabeled
Machine learning for precision medicine
Sarah J. MacEachern, Nils D. Forkert
2020· review· en· Genome· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
452
citations
fundno affno abstractunlabeled
Analysis of the Human Endogenous Coregulator Complexome
Anna Malovannaya, Rainer B. Lanz, Sung Yun Jung, Yaroslava Bulynko, Nguyen Thanh Le, Doug W. Chan +11 more
2011· article· en· Cell· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
441
citations
affunlabeled
Network-based prediction of protein interactions
I. Kovács, Katja Luck, Kerstin Spirohn, Yang Wang, Carl Pollis, Sadie Schlabach +7 more
2019· article· en· Nature Communications· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
441
citations
afffundunlabeled
FunSpec: a web-based cluster interpreter for yeast
Mark D. Robinson, Jörg Grigull, Naveed Mohammad, Timothy R. Hughes
2002· article· en· BMC Bioinformatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
409
citations
affunlabeled
GeneMANIA Prediction Server 2013 Update
Khalid Zuberi, Max Franz, Harold Rodriguez, Jason Montojo, Christian Lopes, Gary D. Bader +1 more
2013· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
403
citations
afffundunlabeled
SMPDB: The Small Molecule Pathway Database
Alex Frolkis, Craig Knox, Emilia L. Lim, Timothy Jewison, Vivian Law, David Hau +8 more
2009· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
375
citations
affunlabeled
WormBase: a modern Model Organism Information Resource
Todd Harris, Valerio Arnaboldi, Scott Cain, Juancarlos Chan, Wen J. Chen, Jae‐Hyoung Cho +22 more
2019· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
368
citations

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