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4,299,418 works, Canadian by any of four routes.

Every filter state is a URL; the URL is the query; the query is citable via /q/⟨hash⟩. The page, the API and the export parse the same parameters.

The current cohort, streamed from the database: every work column, the machine labels, the provisional scores, and the per-row validation status. Exports are capped at 100,000 rows. Mints a permanent /q/ link for this exact query. The same filters always produce the same link, whoever asks.

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Bioinformatics and Genomic Networks
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Direct Codex and Gemma labels are unvalidated and sparse. Distilled predictions cover the full frame and are also unvalidated. Choose the evidence source explicitly; absence of a direct label is never a negative label.

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The four routes compose: require the funder route and exclude affiliation to get the funder-only stratum no affiliation-based frame ever sees.

1,922 results · 1 filter active ·
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20002025
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Machine labels · sparse coverage
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An unlabeled work is unknown, not a negative. Label coverage is reported on every query.
1,922 works in the cohort · of 4,299,418page 3 of 39

Labels cover 6 of 1,922 works in this cohort. The rest are unlabeled, which is not a negative label: the label table is sparse today and grows as labeling rounds land.

Distilled predictions cover 1,922 of 1,922 works in this cohort. Predictions are machine_predicted_unvalidated. The Gemma side is a direct model label for every work (title-only); the Codex side is a distilled, calibrated classifier. Candidate is the union; consensus is the intersection.

afffundno abstractunlabeled
Pathway and network analysis of cancer genomes
Rune Linding, Pau Creixell, Jüri Reimand, Gary D. Bader, Lincoln Stein, B. F. Francis Ouellette +13 more
2015· article· en· Nature Methods· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
358
citations
affunlabeled
BioMart Central Portal—unified access to biological data
Syed Haider, Benoît Ballester, Damian Smedley, Junjun Zhang, Peter Rice, Arek Kasprzyk
2009· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
341
citations
afffundunlabeled
Systematic analysis of complex genetic interactions
Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen +26 more
2018· article· en· Science· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
314
citations
afffundunlabeled
The functional landscape of mouse gene expression
Wen Zhang, Quaid Morris, Ofer Shai, Malina A. Bakowski, Nicholas Mitsakakis, Naveed Mohammad +19 more
2004· article· en· Journal of Biology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
314
citations
afffundunlabeled
A Predicted Interactome for Arabidopsis
Jane Geisler-Lee, Nicholas O’Toole, Ron Ammar, Nicholas J. Provart, A. Harvey Millar, Matt Geisler
2007· article· en· PLANT PHYSIOLOGY· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
311
citations
afffundunlabeled
Fundamentals of protein interaction network mapping
Jamie Snider, Max Kotlyar, Punit Saraon, Zhong Yao, Igor Jurišica, Igor Štagljar
2015· review· en· Molecular Systems Biology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
305
citations
afffundunlabeled
Reactome graph database: Efficient access to complex pathway data
Antonio Fabregat, Florian Korninger, Guilherme Viteri, Konstantinos Sidiropoulos, Pablo Marín-García, Peipei Ping +4 more
2018· article· en· PLoS Computational Biology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
289
citations
fundaboutno affunlabeled
NAViGaTOR: Network Analysis, Visualization and Graphing Toronto
Kevin R. Brown, David Otasek, Muhammad Ali, Michael J. McGuffin, Wing Xie, Baiju Devani +2 more
2009· article· en· Bioinformatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
273
citations
affunlabeled
A map of human cancer signaling
Qinghua Cui, Yun Ma, María Jaramillo, Hamza Bari, Arif Awan, Song Yang +6 more
2007· article· en· Molecular Systems Biology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
269
citations
afffundunlabeled
Enter the Matrix: Factorization Uncovers Knowledge from Omics
Genevieve Stein-O’Brien, Raman Arora, Aedín C. Culhane, Alexander V. Favorov, Lana X. Garmire, Casey S. Greene +6 more
2018· review· en· Trends in Genetics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
266
citations
affno abstractunlabeled
Evolutionary biology of cancer
Bernard J. Crespi, Kyle Summers
2005· article· en· Trends in Ecology & Evolution· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
264
citations
afffundunlabeled
Improving gene set analysis of microarray data by SAM-GS
Irina Dinu, John D. Potter, Thomas Mueller, Qi Liu, Adeniyi J. Adewale, Gian S. Jhangri +4 more
2007· article· en· BMC Bioinformatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
263
citations
affno abstractunlabeled
Computational Prediction of Protein–Protein Interactions
Lucy Skrabanek, Harpreet K. Saini, Gary D. Bader, Anton J. Enright
2007· review· en· Molecular Biotechnology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
261
citations
affno abstractunlabeled
The binary protein-protein interaction landscape of Escherichia coli
Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold +12 more
2014· article· en· Nature Biotechnology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
256
citations
affunlabeled
Drug repositioning for personalized medicine
Yvonne Y. Li, Steven J.M. Jones
2012· review· en· Genome Medicine· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
255
citations
afffundunlabeled
Combining biological networks to predict genetic interactions
Sharyl L. Wong, Lan V. Zhang, Amy H.Y. Tong, Zhijian Li, Debra S. Goldberg, Oliver D. King +6 more
2004· article· en· Proceedings of the National Academy of Sciences· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
254
citations
affunlabeled
RCy3: Network biology using Cytoscape from within R
Julia Gustavsen, Shraddha Pai, Ruth Isserlin, Barry Demchak, Alexander R. Pico
2019· preprint· en· F1000Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
204
citations

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