A new paradigm in phosphoinositide signaling? (Comment on DOI 10.1002/bies.201100195)
Notice bibliographique
Résumé
Membrane associated phosphatidylinositides, notably phosphatidylinositol 3,4,5-trisphosphate (PtdIns(3,4,5)P3), regulate numerous cellular functions, so their levels must be tightly regulated or diseases such as inflammation, cancer, and diabetes can result 1. In response to extracellular stimuli, phosphoinositide 3-kinase (PI3K) enzymes become activated to produce PtdIns(3,4,5)P3. Phosphoinositol (PI) phosphatases can counter the action of PI3Ks by dephosphorylating PtdIns(3,4,5)P3, but unlike PI3Ks, the enzymatic activity of PI phosphatases were originally thought to be constitutively “on” even in the absence of extracellular signals. Instead of changes in intrinsic enzyme activity, certain PI phosphatases such as SHIP1 or SHIP2 were thought to be primarily regulated by their recruitment to the membrane where they can then access and hydrolyze PtdIns(3,4,5)P3. However, as summarized by Elong Edimo et al., we are now appreciating that mechanisms such as reversible phosphorylations of PI phosphatase on serine and threonine (ser/thr) residues can alter not only their subcellular location, but also their intrinsic enzyme activity 2. SHIP1/2 were both first identified as SH2 domain containing, tyrosine phosphorylated proteins which become recruited to the membrane through SH2 domain interactions with tyrosine phosphorylated receptors or receptor associated signaling complexes. Tyrosine phosphorylation of SHIP1/2 is widely used as a surrogate marker of SHIP1/2 activation, but tyrosine phosphorylation does not alter SHIP1/2 enzyme activity and mainly functions to shunt SHIP1 to proteasome mediated degradation 3. Recently, however, studies have shown that the intrinsic enzyme activity of several PI phosphatases, including SHIP1, were indeed subject to end-product allosteric activation 4. Furthermore, some PI phosphatases can be recruited to the membrane through inherent lipid binding PH-like domains as well as of SH2-phosphotyrosyl interactions 5. Indeed, that is the case with SHIP1. In addition to these mechanisms, a role for ser/thr phosphorylations of PI phosphatases such as SHIP1/2 in regulating their activity and cellular localization is becoming apparent 2. Specifically, phosphorylation of SHIP1 by a cyclic AMP dependent kinase has been shown to increase SHIP1 enzyme activity 6, while SHIP2 also undergoes phosphorylation at several ser/thr residues with phosphorylation of serine 132 required for SHIP2 localization to nuclear speckles 7. Interestingly, SHIP2 has been shown to physically associate with a protein phosphatase PP2A subunit and this interaction may keep its basal phosphorylation low 8. Other PI phosphatases such as SYJ1 and PTEN have also been found to undergo ser/thr phosphorylation and/or associate with PP2A 2. The model that emerges is that PI phosphatases, rather than being basally active, are enzymes whose activity, interaction with cellular signaling complexes and localization are tightly regulated through multiple mechanisms. Many questions remain to be answered. What are the identities of the ser/thr protein kinases and phosphatases which target SHIP1/2 and other PI phosphatases? How does regulation by ser/thr phosphorylation integrate with the allosteric activation of intrinsic enzyme activity? How do ser/thr phosphorylation-mediated changes in localization coordinate with changes mediated by SH2-phosphotyrosyl, or direct PH-like domain interactions with membrane phospholipids? Understanding the role that ser/thr phosphorylation plays in regulating PI phosphatase function will provide insight into human diseases such as inflammation, cancer and diabetes, in which dysregulated PI phosphatase functions have been implicated.
Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.
Comment cette classification a été obtenuedéplier
Prédiction distillée sur la base complète
Imitation des enseignantsNi prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.
Scores Codex et Gemma par catégorie
| Catégorie | Codex | Gemma |
|---|---|---|
| Métarecherche | 0,000 | 0,000 |
| Méta-épidémiologie (sens strict) | 0,001 | 0,001 |
| Méta-épidémiologie (sens large) | 0,001 | 0,000 |
| Bibliométrie | 0,000 | 0,000 |
| Études des sciences et des technologies | 0,000 | 0,000 |
| Communication savante | 0,000 | 0,000 |
| Science ouverte | 0,001 | 0,000 |
| Intégrité de la recherche | 0,002 | 0,001 |
| Charge utile insuffisante (le modèle a refusé de juger) | 0,002 | 0,001 |
Scores machine (provisoires)
Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.
Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.
score_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découleClassification
machine, non validéePrédiction automatique; les deux têtes enseignantes s’accordent sur ce qui est montré ici.
Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».