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Enregistrement W2050044081 · doi:10.1093/aje/kwq154

RE: "SMOKING AND PARKINSON'S DISEASE: USING PARENTAL SMOKING AS A PROXY TO EXPLORE CAUSALITY"

2010· letter· en· W2050044081 sur OpenAlexaff
Charles Poole, Jay S. Kaufman

Notice bibliographique

RevueAmerican Journal of Epidemiology · 2010
Typeletter
Langueen
DomaineMathematics
ThématiqueAdvanced Causal Inference Techniques
Établissements canadiensMcGill University
Organismes subventionnairesnon disponible
Mots-clésCausality (physics)Proxy (statistics)MedicineDiseaseEnvironmental healthInternal medicineStatisticsMathematics

Résumé

récupéré en direct d'OpenAlex

We applaud O'Reilly et al. (1) for using directed acyclic graphs (DAGs) to convey structural assumptions in interpreting substantive research results. In their recent article, the authors showed an inverse association between parental smoking and offspring Parkinson's disease (PD) (1). They then stratified the results by offspring smoking status and reported no association between PD and parental smoking among the nonsmokers. As the authors noted, these results would be expected (notwithstanding chance, confounding, and other biases) if offspring smoking were an intermediate factor on a causal path from parental smoking to offspring PD (see the authors’ Figure 3), but not under the hypotheses that parental smoking has a direct effect on offspring PD and that prediagnostic PD in the offspring affects their smoking habits (“reverse prevention”; see the authors’ Figure 2). The DAGs O'Reilly et al. drew to depict these and other hypotheses raised additional questions, however, as clarifying devices often do. It seems unarguable that in all plausible structures in this context, parental smoking directly affects offspring smoking and offspring PD does not affect parental smoking. Those assumptions leave the 6 logically possible structures among the 3 core variables shown in our Table 1. One of them, in which parental smoking directly affects offspring PD but offspring smoking does not, might be too implausible to consider. We wonder, however, if the authors agree that it might be worthwhile to entertain the other 2 core structures in our Table 1. Each is composed of hypothetical effects the authors included in at least 1 of their DAGs. Logically Possible Causal Structures Among Parental Smoking, Offspring Smoking, and Offspring Parkinson's Disease, Given a Direct Effect of Parental Smoking on Offspring Smoking and No Effect of Offspring Parkinson's Disease on Parental Smoking Abbreviation: PD, Parkinson's disease. Logically Possible Causal Structures Among Parental Smoking, Offspring Smoking, and Offspring Parkinson's Disease, Given a Direct Effect of Parental Smoking on Offspring Smoking and No Effect of Offspring Parkinson's Disease on Parental Smoking Abbreviation: PD, Parkinson's disease. Each of O'Reilly et al.’s DAGs has a different array of covariates of concern as potential confounders (1). In Figures 1 and 3, the only such covariates are common causes of offspring smoking and offspring PD. Those covariates are absent from their Figure 5, which shows covariates affecting parental smoking and offspring PD. In Figure 4, every covariate that affects any 2 of the 3 core variables affects all of them. Figure 2 contains no covariates. It would be helpful for the authors to settle on a consistent set of covariate structures they consider reasonable and to show that set on the DAG for each plausible core structure (e.g., the 3 they have already considered plus the 2 suggested in our Table 1). Then the results of the data analysis could be interpreted in light of diagrams, each of which has its own set of confounding paths, but all of which are based on the same tenable configuration of covariate effects. Finally, it would be necessary to see the quantitative results from the authors’ analysis of parental smoking and offspring PD in all strata of offspring smoking, as opposed to an assertion that in 1 stratum there was “no association,” which can mean many things to many epidemiologists. For instance, the authors’ Figure 3 (given adequate control of the covariates depicted) predicts no association between parental smoking and offspring PD in every stratum of offspring smoking, not just the nonsmokers. In addition, without adequate control for the covariates in Figure 3, a null association could be observed between parental smoking and offspring PD within strata of offspring smoking, even in the presence of a strong direct effect of parental smoking on offspring PD (2, 3). We emphasize that these suggestions arose much more readily because the authors drew and reported on hypothetical DAGs in their paper (1), a practice we hope will become more widespread. When methodologists write generically about using DAGs, they understandably need to sidestep the whole “what's the right DAG” question. When researchers with substantive interests use DAGs, however, that question is the main and unavoidable one. Conflict of interest: none declared.

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction machine sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.

score de la tête « metaresearch » (Codex)0,011
score de la tête « metaresearch » (Gemma)0,091
Version: metacan-v3-hybrid-931329e0061cStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Sans objet · Signal consensuel: Sans objet
GenreSignal candidat: Commentaire · Signal consensuel: Commentaire
Score de désaccord entre enseignants0,069
Score d'incertitude au seuil0,060

Scores du classifieur distillé par catégorie (deux têtes)

CatégorieCodexGemma
Métarecherche0,0110,091
Méta-épidémiologie (sens strict)0,0020,002
Méta-épidémiologie (sens large)0,0030,002
Bibliométrie0,0020,002
Études des sciences et des technologies0,0050,005
Communication savante0,0050,004
Science ouverte0,0050,002
Intégrité de la recherche0,0690,093
Charge utile insuffisante (le modèle a refusé de juger)0,0080,012

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,233
Tête enseignante GPT0,456
Écart entre enseignants0,224 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeSans objet
Domainenon disponible
GenreCommentaire

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations0
Publié2010
Routes d'admission1
Résumé présentnon

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