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Enregistrement W2105140950 · doi:10.1002/ibd.20494

Assessing environmental risk factors affecting the inflammatory bowel diseases: A joint workshop of the Crohnʼs & Colitis Foundations of Canada and the USA

2008· article· en· W2105140950 sur OpenAlexafffundabout
Çharles N. Bernstein

Notice bibliographique

RevueInflammatory Bowel Diseases · 2008
Typearticle
Langueen
DomaineBiochemistry, Genetics and Molecular Biology
ThématiqueInflammatory Bowel Disease
Établissements canadiensUniversity of Manitoba
Organismes subventionnairesCrohn's and Colitis Foundation of CanadaCrohn's and Colitis Foundation of America
Mots-clésInflammatory Bowel DiseasesInflammatory bowel diseaseMedicineCrohn's diseaseColitisGastroenterologyUlcerative colitisInternal medicineDisease

Résumé

récupéré en direct d'OpenAlex

Canadian Program Organizers: Andrew Stadnyk (Dalhousie University, Halifax, NS), Charles Bernstein (University of Manitoba, Winnipeg, MB), John Marshall (McMaster University, Hamilton, ON), and Devendra Amre (University of Montreal, Montreal, QC). American Program Organizers: Jonathan Braun (UCLA, Los Angeles, CA), Balfour Sartor (University of North Carolina, Chapel Hill, NC), and Scott Snapper (Massachusetts General Hospital, Boston, MA). It is widely considered that chronic idiopathic inflammatory bowel diseases (IBDs) occur due to an aberrant immune response to luminal antigens in persons who are genetically predisposed. While remarkable advances have been made in identifying specific genetic linkages that underlie this predisposition, these have not explained the disease etiology. In addition, striking epidemiological observations implicate environmental influences on genetic predisposition. Nevertheless, the epidemiology of environmental risk factors in IBD is incompletely understood and in need of further study. Few associations with the environment or lifestyle have been linked confidently with either susceptibility or disease course in IBD. An outstanding example is the paradoxical effect of smoking, wherein quitting smoking is a risk factor for ulcerative colitis while continued smoking is a risk factor for Crohn's disease. Otherwise, inconsistencies among other associations, such as diet, prenatal or perinatal exposures, drinking water, etc., have given rise to more questions than answers. To begin to address these gaps in our knowledge, the Crohn's and Colitis Foundations of Canada and the USA jointly hosted a day-long workshop in Toronto, Ontario, on measuring environmental risk factors as they may pertain to the etiology and severity of chronic human disease. The primary objective was to explore innovative approaches and strategies to identifying and measuring environmental risk factors for IBD. The strategy was to learn from the experience and progress made by researchers studying and treating other human chronic illnesses and apply this knowledge to studies in IBD. In addition to stakeholders in IBD research, experts from various disease disciplines undertaking comprehensive studies of environmental risk factors were invited to share their strategies and progress. The proceedings follow. Organizers' comment: Dr. Bonini presented the hygiene hypothesis as it relates to asthma and allergic disorders, suggesting that it can be applied to IBD as well. He suggested that using probiotics or bacterial extracts to provide the immune system with the microbial education that was missed in childhood because of cleaner living conditions might be a strategy to reverse IBD. Noninfectious agents such as allergens, pollution, diet, and exercise, as well as infectious agents all play a role in asthma. There is a growing interest in the relationship between infections and allergy, and the ‘hygiene hypothesis.’ The general understanding of the mechanisms of allergic respiratory disease includes processes related to allergens and IgE—leading to the accumulation of mucus, vasodilation, contraction of smooth muscle, and late-phase allergic reactions. However, there can also be inflammation independent of IgE. Like allergy, IBD is a multifactorial and polygenic disease. The hygiene hypothesis stems from epidemiological studies of associations between disease and environment and studies of mechanisms underlying these associations (such as the effects of infections on innate and adaptive immunity; role of GI microbiota, etc.). It suggests that exposure to less hygienic environments facilitates immune responses early in life that can be protective against antigens experienced later in life. A corollary to this is that in developed nations the lower exposure to infections early in life has rendered immune responses incapable of protecting or being tolerant of foreign antigens later in life. National Health and Nutrition Examination Surveys (NHANES) data show stronger associations with allergic disease among people who are hepatitis-negative than those who are positive. Exposure to infectious agents can be a marker for disease and risk—but general environment and exposures need to be taken into account. Genetic–environmental interactions can happen in different ways. This can range from food-borne microbes, viral infections, and more. Developing countries have lower rates of allergic disorders. Their environment includes larger family size, more exposure to livestock, low antibiotic use, intestinal microbiota that are variable and transient, high helminth burden, poor sanitation, and high rates of orofecal transfer. In contrast, Western countries have higher rates of allergic disorders. Their environment includes small family size, high antibiotic use, low or absent helminth burden, good sanitation, and low rates of orofecal transfer. Could mimicking the microbial ‘education’ of the immune system be used as a strategy to reverse the epidemic trend of atopy and allergic asthma? Some evidence suggests probiotics and bacterial extracts might be useful for this, but more studies need to be done. Organizers' comment: Dr. Rewers presented a process for assembling very large prospectively enrolled cohorts of children at risk for developing diabetes. Such cohort selection can allow an assessment of dietary factors. Studies show that the timing of the introduction of certain foods to infants can affect the risk of developing celiac and diabetic autoimmunity. This may also be relevant in IBD. A similar prospective study, using biomarkers specific to preclinical IBD and including first-degree relatives of IBD patients could potentially help disentangle these factors in the etiology of the disease. The incidence of type-1 diabetes is rising by 3% to 5% annually. This growth rate cannot be explained by genetic models alone. Most causal models of diabetic pathogenesis accept that an environmental agent stimulates the immune system and triggers chronic inflammation of the islets of Langerhans, typically over a long period of development. The Diabetes Autoimmunity Study in the Young (DAISY) was launched in 1993. At-risk nondiabetic children were enrolled if a sibling or 1 parent had diabetes. In addition, over 30,000 babies born at a Colorado hospital underwent HLA screening, and over 1500 children with high-risk genotypes were enrolled. Overall, DAISY has followed over 2500 high-risk infants and over 120 have already developed diabetes or biological markers for islet autoimmunity. Although the timing and frequency of testing can affect accuracy, the idea was to relate development of islet autoantibodies and diabetes to environmental exposures measured prospectively before diabetes developed. Islet autoantibodies are powerful predictors of diabetes. DAISY also assessed celiac disease because there is a shared genetic susceptibility with type-1 diabetes and availability of a sensitive and specific serologic test. Up to 1% of children in Colorado develop celiac disease. Similar studies are being done by a consortium of research groups from 4 countries, the Environmental Determinants of Diabetes in The Young (TEDDY). The purpose of TEDDY is to identify gene–environment interactions which cause prediabetic autoimmunity and type-1 diabetes. Started in 2004, the project will screen over 350,000 newborns from the general population, including 3400 first-degree relative infants with high-risk genotypes. Approximately 40% of the cohort has already been enrolled and will be reassessed at least annually. At each visit, both infections and noninfectious exposures (e.g., diet, toxins, psychosocial factors) will be evaluated. Assessment will likely be conducted more than once per year. Dietary factors are of interest as studies show that the timing of the introduction of certain foods to infants can affect the risk of developing celiac and diabetic autoimmunity. Organizers' comment: Dr. Perl presented evidence of a certain geographic location associated with the development of neurodegenerative disease through the presence of heavy metals. If such a strong link is present, migration patterns and IBD epidemiology may help unearth clues to disease etiology. Alzheimer's disease (AD) includes the development of neurofibrillary tangles associated with a loss of cognitive function and dementia. Studies show aluminum can induce experimental neurofibrillary degeneration and that the Alzheimer brain has excessive amounts of aluminum in neurons with tangles. Since aluminum is not used by biological systems, its presence in tissues implies an environmental source. Following World War II, large numbers of cases of amyotrophic lateral sclerosis (ALS) and a disease similar to Parkinson's disease with severe dementia were identified among the native population living on Guam. Brains of ALS/PDC cases showed neurofibrillary tangles identical to those seen in AD, but with aluminum levels that were 10 times higher than are seen in AD. ALS/PDC has changed over the past 25 years with observation of more pure dementia cases, fewer ALS cases, and a 10-year increase in age of onset. Such rapid changes in a disease suggest an environmental etiology. Furthermore, Filipino migrants to Guam are at high risk of developing ALS/PDC, but only after they have lived on the island for 20 years or more. Although there has been a large military presence in Guam since World War II, people temporarily stationed on the island do not develop ALS/PDC. While there are genetic features leading to ALS/PDC susceptibility, the specifics are not known. Either ALS/PDC results from long-time exposure to an environmental factor on Guam, or there is early exposure followed by a long period of latency. Both aluminum and iron are present in neurofibrillary tangles of AD as well as damaged nerve cells in Parkinson's disease. While there is an iron and aluminum association in these diseases, causation has not been established. IBD and neurodegenerative diseases appear to arise as the result of interactions between environmental and genetic factors. Due to the issues of timing, the nature of exposure, and complex interactions, identifying relevant environmental factors is much more difficult than studying genetic ones. Because they are modifiable, environmental factors are arguably more important. Studies of etiological factors influencing neurodegeneration suggest the importance of the phenomenon of latency. Organizers' comment: Dr. Lang presented large projects under way through NIH that are assessing the effects of environmental factors on humans. The NIEHS studies factors in the environment (traditionally chemical toxicology) that can adversely affect human health. In the US, about 70%–90% of diseases are not accounted for by genetic predisposition, but rather by reversible behaviors and environmental exposures. The Environmental Protection Agency (EPA) uses NIEHS data to help develop risk assessment, standards, public health policies, and more. NIEHS research ranges from basic biology to public health. There are in environment can affect health. Some can be as lifestyle and play a disease and age can affect is from different disciplines to environmental factors may by This is by with and have a effect on the of the the of Similar may the risk for NIEHS The This at and human genetic models for the effects of environmental factors on humans. are used to learn about the mechanisms of The and Health The is at factors such as lifestyle and environmental exposures. A is to to these factors and they to human health. Exposure is on developing of The This is a of the microbial at using from the human is it could be to good health. Organizers' comment: epidemiological data of IBD suggests that Canada has among the rates of IBD in the of the such as the of IBD among in of their living conditions being different than and the rates in to in Canada may to environmental The of IBD is the of IBD in North Started in it includes data on with IBD. were through the Health which health data to to Crohn's disease rates in but incidence rates were at about colitis a similar from to with a lower than that of The rates of and are lower among to While genetic might for could of in poor and living have been with and the hygiene hypothesis may for the relative of IBD among At the have rates of other chronic immune diseases, such as A that Canadian showed other also had high rates of IBD. The rates were among people on the and among those on the in The low rates might environmental or its population which includes of are Overall, Canada has high rates of both and An in to Winnipeg, rates of IBD that were those of incidence rates have been to levels to The IBD Study in enrolled years in a from the of IBD associations for risk were including first-degree relatives with fewer and fewer people at A which childhood and factors to show either associated with IBD onset. Organizers' comment: has higher rates of than rates of to of IBD also suggest that there are environmental from studies show that rates of and are in countries, and that the incidence of disease is are The high rates in This population in in and includes data on including The epidemiology of IBD in is by a higher incidence of than and large show the incidence of in is rising due to on IBD in and were with evidence of in and of IBD have also been In of cases the of IBD about years after in later on in the are environmental with a on children with or between and at age years or The cases of IBD and Some of the risk factors for developing IBD identified family of been against and A large that patterns of IBD cases in showed between with evidence for a link between high incidence and are being in more in the of Both and family are being for the presence of infectious agents such as and is associated with and an workshop on and will to the role of this agent in the disease. Organizers' comment: The trend in and suggests a cohort in geographic and for IBD and might suggest It is that a etiology for disease has been identified to be an from has the past from between and a similar as from Since the rates of both diseases have followed a The of is in the of each and both from different countries similar The between the changes of from and suggest the presence of 1 primary risk factor for the of both diseases, and at the of 1 risk for the of alone. In countries the of from and and patterns for all Similar to both of the risk of from to rise in born the of the It before the of the and has continued to since The rise and in from those of both The that exposure to the relevant risk factors of occur early life. the of and its associated patterns in and an could present a for such of as well. The between the geographic of from and were using and IBD to be more in countries and in and American The similar of all 4 diseases in among their geographic The in the geographic of and may all 4 diseases share risk factors. Organizers' comment: as a etiological factor in IBD is a complex to infections, in the of the hygiene on to to exposures living location in developing countries, etc., and are widely A for IBD pathogenesis is likely and to immune effects of early and childhood infections and diet, and lifestyle among other factors and these factors the environmental risk infections and have been evidence studies the in studying these exposures using There are in since they complex exposures over to to exposures living location in developing countries, etc., and are widely The of between these and hygienic can between and This is the way to for the associations with IBD for Dietary influences are considered in the development of IBD. However, is not a exposure, and its assessment is In studies can dietary associations by exposures between IBD patients and using However, cannot that the being measured to that to disease as the of IBD can to changes in dietary studies using of these In to the role of in for these exposures need to be as well as to these exposures. research is to develop biomarkers of dietary that are and are not to studies but apply to prospective epidemiological as well. Organizers' comment: conducted dietary assessment can provide etiological into in need to be comprehensive relative to and There are in used to dietary patterns for To help people size, or relative in the developed by Dr. be public health is about people and it or against disease. The is the in but has are to by frequency of foods and associations between and disease. It the the frequency of and the of the on each It not provide in epidemiology relevant to of a dietary assessment issues and the health has a or genetic predisposition, exposures, infectious diseases, or gene–environment of about specific foods over and and of not the of and may not be evaluated. on is or disease or in affect levels of is about the relationship and to epidemiological conducted dietary assessment can provide etiological into This is relevant to IBD research and as has been in the causal and is by the disease It is to in IBD Organizers' comment: To the mechanisms of Dr. Sartor that dietary and iron the growth of while the growth and of Dietary and immune in different of the each with their Some and that are the for environmental triggers of IBD or that the microbiota, as well as smoking, and of can the function of the or of and in the and from to and in the The introduction and of of aluminum of and other factors with the IBD is understood about IBD. colitis in is by high in or Dietary intestinal inflammation by immune and the growth and of is an growth factor for which also stimulates the of bacterial factor that and more. as an to innate and immune responses by responses and studies show that dietary and iron and that not disease. Dr. Sartor that and bacterial growth in the small and may luminal bacterial increase intestinal and inflammation in experimental In dietary affect bacterial and immune which can the course of chronic intestinal Organizers' comment: The IBD is a in which were taken from people with and in each were was not present to in than It was that the GI microbial between the and patients to the IBD was associated with an of such as and There was a of microbiota and there are about the of between of genetic a of between There are of and In bacterial were over are known. for the of using cannot be In this is a because that cannot be is used for but is a and certain cannot be from each have only in their but their are the There is much evidence for microbial in but it is studies show that and genetically IBD and that IBD the of the GI has been to The IBD is a in which were taken from people with and in each were was not present to in than were It was that the GI microbial between the and patients to the The disease was more than or IBD was associated with an of such as and There was a of and A of and cases had patients to be but antibiotic was not a and with had more microbiota than and were not in the study. the assessed the in patients who have had disease and not the which is likely more Organizers' comment: the of intestinal can be very and could be bacterial levels in the The of can result in of the innate immune In there may be a of microbiota specific in the are and are by and but there is a high of This and may be the result of the immune and inflammatory response and microbial colitis has been as a and can colitis in and in show changes in intestinal presence of a immune system much of the A of studies were using and with this alone. In the by 1 and for at least was in the small research is a of the relationship with do to the presence of to the immune system by its and to the intestinal response by It can to be and are adaptive and and to the presence of both innate and adaptive immune or may this may to less of such as or of There are relevant of these results for IBD. specific could microbial in the The of can result in of the innate immune In there may be a of Organizers' comment: In their were to leading to the about the importance of in health. of high to a to the may be to colitis in those genetically predisposed. IBD rates are than can be explained by and the incidence has since Dietary are associated with inflammatory including and and may affect IBD as well. the of inflammatory and are to IBD. against colitis in research was could be and were either or an for The could not be because by 4 A cause of was were had of and the of was to for the further the were to have inflammation and which was the cause of To the dietary for intestinal inflammation in and and to or for groups and but not diet, intestinal with to a in The inflammation both and is to be related to by inflammatory of high to the to observations are likely to be relevant to as is and in response to high in both and and are widely mechanisms of this to be Organizers' comment: in between various groups suggest that there are between genetic and environmental factors. Dr. presented the development of an of of diabetes and factors. is an example of a prospectively developed cohort over prediabetic people in Dr. studies the different risk among different groups for disease has Canada data from and used to people into Although specific were used to identify changes from were for In a of 4 groups in researchers that people of had higher and that people of had lower but higher While the population had high they and more more and and were more likely to have The to while had lower levels than the which might also relate to in among various groups suggest that there are and interactions between genetic and environmental factors. influences need to be in American population, less than was the for independent of Studies of gene–environment interactions in the development of diabetes are and large numbers of is a large of of diabetes and which is over prediabetic people in factors being assessed diet, and The will be in In the at the of the on a of The has changed with of microbiota was before this is not known. microbiota is is being were about the of and questions of researchers can and In IBD and other chronic disorders, is but prospective studies are The Health Study has dietary can be over to 20 In addition to interactions between dietary and and the immune response and the microbiota be The idea of a long period epidemiological studies There can be a long from environmental exposure to preclinical intestinal and disease. the development of diabetes in has been associated with the of could play a role in developing the microbiota, and could also be relevant to IBD. people from early childhood if environmental exposures are to be The purpose of the was to explore to the An in to chronic diseases is that of the such as exposure, there are in the population, such as who have less do not have more bowel or There was as to or infectious agents be in of early life are at risk and need more study. There are if to people they are less than years of There are in and studying However, family are there may be environmental and genetic clues from both those who are and those who are environments are not may with larger features such as the of can It be to to for disease development (e.g., in with high or rates of The of the National National and to the of the for in the workshop a

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction machine sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.

score de la tête « metaresearch » (Codex)0,027
score de la tête « metaresearch » (Gemma)0,013
Version: metacan-v3-hybrid-931329e0061cStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Théorique ou conceptuel · Signal consensuel: aucune
GenreSignal candidat: Synthèse · Signal consensuel: aucune
Score de désaccord entre enseignants0,363
Score d'incertitude au seuil0,731

Scores du classifieur distillé par catégorie (deux têtes)

CatégorieCodexGemma
Métarecherche0,0270,013
Méta-épidémiologie (sens strict)0,0010,001
Méta-épidémiologie (sens large)0,0010,001
Bibliométrie0,0030,002
Études des sciences et des technologies0,0050,002
Communication savante0,0030,001
Science ouverte0,0020,005
Intégrité de la recherche0,0030,005
Charge utile insuffisante (le modèle a refusé de juger)0,0040,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,012
Tête enseignante GPT0,228
Écart entre enseignants0,216 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeThéorique ou conceptuel
Domainenon disponible
GenreSynthèse

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations22
Publié2008
Routes d'admission3
Résumé présentnon

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