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Enregistrement W2120450960 · doi:10.1093/cid/ciq079

Noncirrhotic Portal Hypertension and Didanosine: A Re-Analysis

2010· letter· en· W2120450960 sur OpenAlexafffund
Jim Young, Marina B. Klein, Bruno Ledergerber

Notice bibliographique

RevueClinical Infectious Diseases · 2010
Typeletter
Langueen
DomaineMedicine
ThématiqueLiver Disease and Transplantation
Établissements canadiensMcGill University Health Centre
Organismes subventionnairesNational Institutes of HealthUniversität ZürichCanadian Institutes of Health ResearchMcGill University Health CentreGilead SciencesMcGill UniversityGlaxoSmithKlineBristol-Myers Squibb
Mots-clésDidanosineMedicinePortal hypertensionInternal medicineHuman immunodeficiency virus (HIV)GastroenterologyVirologySidaViral diseaseCirrhosis

Résumé

récupéré en direct d'OpenAlex

TO THE EDITOR—In 2020, Kovari et al [1] reported a strong association between exposure to didanosine (DDI) and noncirrhotic portal hypertension (NCPH), a rare condition likely to be of multifactorial etiology. However, the authors were not able to control confounding through multivariate modeling because of the small number of case patients. This limitation is typical of a rare condition, making it more difficult to evaluate the association of antiretroviral use with such events because of the number of factors that influence the prescription of these drugs. With only 15 cases, adding even a single confounder to a model may introduce more bias than it removes because of small sample bias away from the null value (an odds ratio of 1) [2]. Their study was, however, nested within the Swiss HIV Cohort Study; thus, other methods of confounder control are available. These methods require additional modeling of DDI use in the wider cohort. Using logistic regression, we modeled the probability of first use of DDI over time for each patient in the cohort, starting from the month when either infection was first known or DDI was first marketed in Switzerland until the month of either first use of DDI or the end of follow-up. Our model for first use of DDI had a time-dependent intercept based on a cubic spline and covariates of sex, ethnicity, education, likely transmission group, age, the number of failed regimens (time dependent), and time-dependent indicators for hepatitis (chronic B or C), lipoatrophy, diabetes, nervous system toxicity, Centers for Disease Control and Prevention groups B and C, use of zalcitabine, use of stavudine, use of tenofovir, gastrointestinal toxicity, and pregnancy and further interaction terms between these last 4 indicators and the time of related warnings issued either by the US Food and Drug Administration or the drug company. From this model, we then calculated a propensity score for each patient at each point in time: the probability of exposure to DDI, given the patient's covariate and treatment history up to that point. This probability is related to an inverse probability of treatment weight (IPTW) (see Appendix 1 in [3]) and can therefore be calculated in a similar way (see Appendix in [4]). We then re-analysed the original 15 case patients and 75 matched control subjects, adjusting for a single covariate: the propensity score at the date of diagnosis in the case patient. This means that case and control exposures were compared at a common value of the propensity to be exposed to DDI. We made this comparison at a common value of the log-transformed propensity score; with a log transformation, both exposed and unexposed patients had propensity scores with a similar variance, as is necessary for this method of adjustment [5]. Finally, we added prior information to our re-analysis. With only a few matched sets, small sample bias can be severe even when exposure is the only variable in the model [6]. Adding prior information can limit this bias by assigning essentially zero prior probability to clinically implausible values of an estimate. One of us (MBK), a clinician with expertise in liver disease and HIV infection, having read other case reports and series (see Table 1 in [1]) and before reading about this study, asserted her opinion that the odds of NCPH in exposed patients, compared to those unexposed, was a ratio of 1.2 per year of exposure to DDI, with a 95% confidence interval (CI) of .5–2.5. We generated a set of matched case-control pairs to represent this prior opinion and then reran the analysis using both prior and real data [7,8]. The published unadjusted odds ratio for a year of exposure to DDI is 3.4 (95% CI, 1.5–8.1) [1]. After adjustment using the log propensity score, our estimate was 4.0 (95% CI, 1.2–13); a weighted analysis using IPTWs gave an estimate of 4.7 (95% CI, 1.4–16). In the Bayesian analysis of prior and real data, the adjusted estimate was 2.2 (95% CI, 1.5–3.3). Propensity scores and IPTWs are ideal methods of confounder control if the outcome is rare but treatment is common [9]. The 2 methods use very different statistical logic; that both lead to a similar estimate is reassuring. Propensity scores have a Bayesian interpretation [5]; thus, we used this method for our Bayesian analysis. Our re-analysis showed how even a large number of factors that potentially influence treatment allocation can be accounted for in the analysis of a rare outcome. The strong association between DDI and NCPH reported by Kovari et al [1] does not appear to be an artifact of inadequate confounder control. However, the published estimate is probably an over-estimate to some degree, because of small sample bias. That said, there is sufficient evidence in these data to convince a knowledgeable clinician that the association may be of an order of magnitude (of ≥2) to justify the Food and Drug Administration warning in January 2010 of an increased risk of NCPH among patients exposed to DDI [10]. We thank the Swiss HIV Cohort Study and Helen Kovari for the use of cohort and case-control data. Funding. None reported. Potential conflicts of interest. M.B.K. has been a consultant for GlaxoSmithKline/Viiv; has received grants from Merck, Canadian Institutes of Health Research, National Institutes of Health Research, and Fonds de recherches en sante du Quebec; has served on the speakers’ bureau for Bristol-Myers Squibb, and GlaxoSmithKline/Viiv; has developed presentations for Gilead, GlaxoSmithKliine/Viiv; and has had meeting expenses paid by GlaxoSmithKline/Viiv. B.L. has served on the board for Tibotec and the speakers’ bureau for Tibotec, Roche, and Gilead (paid to institution); and has had meeting expenses paid by Bristol-Myers Squibb (paid to institution). J.Y.: no conflicts.

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction machine sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.

score de la tête « metaresearch » (Codex)0,001
score de la tête « metaresearch » (Gemma)0,005
Version: metacan-v3-hybrid-931329e0061cStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Observationnel · Signal consensuel: Observationnel
GenreSignal candidat: Empirique · Signal consensuel: Empirique
Score de désaccord entre enseignants0,005
Score d'incertitude au seuil0,011

Scores du classifieur distillé par catégorie (deux têtes)

CatégorieCodexGemma
Métarecherche0,0010,005
Méta-épidémiologie (sens strict)0,0010,000
Méta-épidémiologie (sens large)0,0010,001
Bibliométrie0,0010,002
Études des sciences et des technologies0,0010,001
Communication savante0,0010,001
Science ouverte0,0010,000
Intégrité de la recherche0,0020,002
Charge utile insuffisante (le modèle a refusé de juger)0,0030,001

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,033
Tête enseignante GPT0,327
Écart entre enseignants0,294 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeObservationnel
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations4
Publié2010
Routes d'admission2
Résumé présentnon

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