Temporal Texture Analysis of Normal Appearing White Matter in Multiple Sclerosis
Notice bibliographique
Résumé
H. Zhu, X. Wei, Y. Zhang, G. S. Mayer, J. R. Mitchell University of Calgary, Calgary, Alberta, Canada Synopsis Detecting abnormalities in normal appearing white matter (NAWM) may help reveal the subtle pathological changes in multiple sclerosis (MS). We developed a novel texture analysis technique based on the polar S-transform (PST), a localized Fourier transform providing local frequency information with multi-scale analysis. We applied this algorithm to analyze regions of NAWM on serial T1-weighted Gadoliniumenhanced MRI, and detected early textural changes even before lesion activity becomes evident in terms of focal contrast-enhancement. Introduction Tissue image texture refers to a local characteristic pattern of image intensity that identifies a tissue, such as the subtle “mottle” pattern in NAWM on T2-weighted (T2-w) MRI. Our hypothesis is that as WM becomes abnormal, its underlying texture in MRI may change. Our goal is to develop a sensitive technique to detect subtle textural changes within NAWM, particularly to investigate whether those subtle changes predict subsequent MS lesion formation. Texture analysis using statistical approaches has been applied with some success to the spinal cord, the brain in MS, and other diseases. However, limited success was found in analyzing cerebral NAWM. Texture, by definition, also determines local spectral/frequency content in an image; therefore, texture in this study is defined by local frequency content. The polar Stransform is a new localized Fourier analysis combined with the multi-scale scheme in wavelets. Thus, it provides local Fourier spectral information around each pixel. In addition, the PST has a unique representation of an image, i.e., subtle image intensity changes yield different local frequency distributions. Furthermore, the PST is rotation-invariant, i.e., rotating an image does not change its spectrum. These properties suggest that texture analysis via the PST may provide information on subtle structural changes. Methods One patient with relapsing-remitting MS was examined monthly over a 2-month period on a 3 Tesla MR scanner (GE, Waukesha, WI). In each examination, cross-sectional T1-weighted (T1-w) preand post-contrast and T2-w images (SE, TE/TR = 8/650 ms for T1w, TE/TR = 80/2717 ms for T2w, FOV = 24 cm, matrix size = 512x512, slice thickness = 3 mm, no gap, 50 slices) were acquired. Using the Day 0 scan as a reference, all scans were co-registered by rigid body mappings and corrected for signal intensity variation by calibrating intensity of ventricular CSF over time. MS lesions were identified by a neuro-radiologist. Regions of two T2-w lesions were selected for detailed analysis: an inactive lesion over Days 0-60 and an active lesion first evident at Day 60. For each lesion, an region of interest (ROI) in the T2w image was centered over each lesion large enough to include surrounding NAWM; the same ROI was then placed in the co-registered T1w Gadolinium(Gd)-enhanced images at all time points. Texture analysis was performed on each ROI in the T1-w Gd-enhanced images in the following way: the PST spectrum of the ROI was computed to generate a local 2D Fourier spectrum for each pixel; the 2D local Fourier spectrum at each pixel was reduced into a local 1D spectrum by integrating it along rings of constant width (0.33 cycles/cm) in the Fourier plane (i.e. k-space). The local 1D spectra from a 5x5 ROI within the lesion were averaged and normalized for display and analysis. Results Figures 1 and 2 show the average local 1D spectra derived from the T1-w Gd-enhanced images, from the inactive and active lesions, at 3 examination time points. Note that low frequencies correspond to coarse texture while high frequencies to fine texture. Within the inactive lesion (Figure 1), there is little low frequency content (≤ 4 cycles/cm); most spectral energy is distributed over frequencies 4-10 cycles/cm. This pattern is maintained over time. Figure 2 shows the spectral pattern over time from a region of NAWM that developed a new lesion at Day 60. The Day 60 spectrum is markedly different from both the NAWM and inactive lesion spectra, with high spectral energy at low frequencies (≤ 4 cycles/cm). More interestingly, this spectral difference is already detected at Day 30: the Day 30 spectrum increases slightly at low frequencies than that of Day 0, indicated by the arrow. Discussion Serial texture analysis of T1-w Gd-enhanced MRI demonstrated that significant spectral differences exist between active lesions and NAWM at low frequencies. We also detected a subtle shift of local spectrum towards low frequencies prior to the appearance of a new lesion. These findings suggest that local texture analysis via the PST may help provide an early indication of MRI intensity changes in NAWM in MS.
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Comment cette classification a été obtenuedéplier
Prédiction machine sur la base complète
Imitation des enseignantsNi prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.
Scores du classifieur distillé par catégorie (deux têtes)
| Catégorie | Codex | Gemma |
|---|---|---|
| Métarecherche | 0,000 | 0,000 |
| Méta-épidémiologie (sens strict) | 0,000 | 0,000 |
| Méta-épidémiologie (sens large) | 0,000 | 0,000 |
| Bibliométrie | 0,001 | 0,001 |
| Études des sciences et des technologies | 0,000 | 0,000 |
| Communication savante | 0,000 | 0,000 |
| Science ouverte | 0,000 | 0,000 |
| Intégrité de la recherche | 0,000 | 0,000 |
| Charge utile insuffisante (le modèle a refusé de juger) | 0,001 | 0,000 |
Scores machine (provisoires)
Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.
Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.
score_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découleClassification
machine, non validéePrédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.
Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».