RE: p16/Ki-67 Dual Stain Cytology for Detection of Cervical Precancer in HPV-Positive Women: Table 1.
Notice bibliographique
Résumé
I read with great interest the article by Wentzensen et al. (1). The analysis is biased in that it is constrained to high-risk human papillomavirus (HPV)–positive (hrHPV+) cases only. Although this is made clear by the authors, readers unfamiliar with the consequences of this bias may misinterpret the performance indicators, especially the reported specificity and negative predictive value (NPV). This study compares two binary test combinations: 1) hrHPV plus cytology vs 2) hrHPV plus the dual stain (DS). “Binary tests” means that thresholds are applied to each test to limit the test results to only either positive or negative. Both test combinations are applied as the logical “and” of positive test results, meaning that the combination test result is positive if and only if both component test results are positive. It can be shown that for the “and” test combination, the combined test specificity must be at least as high as that of the most specific component test and could be 100% while the combined test sensitivity will be no more than that of the least sensitive component test and could be 0% (2). The other nontrivial combination of binary tests is the logical “or” of positive test results, which has opposite effects on sensitivity and specificity (2). Two other interesting properties of combining binary tests are: 1) the order in which the individual tests are performed does not matter (they are commutative); and 2) for either “and” or “or” combination, it is not necessary to perform both tests on all persons. For the “and” combination, if the first test result is negative then the combined test result will be negative regardless of the second test result, which is the case for this paper. While the positive predictive value (PPV) reported by Wentzensen et al. is the net performance indicator of the combined tests, the sensitivity, specificity, and NPV are not because the cases negative for hrHPV are not included in the analysis. To illustrate the effect of this, assume that the hrHPV positivity rate was 15% and hrHPV sensitivity was 90%. Then, while the 1509 subjects of this study were hrHPV+, about another 8500 were hrHPV-, plus the component test sensitivities are multiplicative. Table 1 shows the effect for DS triage when all screen cases are included in the analysis, ignoring the effects of verification bias (which are very small for NPV and specificity [2]). Clinical performance indicators for primary hrHPV testing with dual stain triage based on hrHPV+ cases only versus based on all cases screened.*,† * Assumes 8500 hrHPV- cases. † hrHPV test sensitivity of 90%. Clinical performance indicators for primary hrHPV testing with dual stain triage based on hrHPV+ cases only versus based on all cases screened.*,† * Assumes 8500 hrHPV- cases. † hrHPV test sensitivity of 90%. A common clinical interpretation of NPV (2) is via its complement (1-NPV), which is the probability that a woman told she is negative for significant disease actually is not. For CIN2+, the current analysis applied to 10 000 hrHPV+ women who are told they are negative, 356 would not be; whereas for all women screened only 31 of 10 000 told they are negative would not be. Both are correct, but it seems possible that some readers might interpret the reported NPV in the usual way, as being applied to all women screened, especially because the PPV can be correctly interpreted in this way.
Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.
Comment cette classification a été obtenuedéplier
Prédiction machine sur la base complète
Imitation des enseignantsNi prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.
Scores du classifieur distillé par catégorie (deux têtes)
| Catégorie | Codex | Gemma |
|---|---|---|
| Métarecherche | 0,001 | 0,006 |
| Méta-épidémiologie (sens strict) | 0,001 | 0,000 |
| Méta-épidémiologie (sens large) | 0,001 | 0,001 |
| Bibliométrie | 0,001 | 0,000 |
| Études des sciences et des technologies | 0,001 | 0,001 |
| Communication savante | 0,001 | 0,001 |
| Science ouverte | 0,001 | 0,000 |
| Intégrité de la recherche | 0,014 | 0,008 |
| Charge utile insuffisante (le modèle a refusé de juger) | 0,019 | 0,010 |
Scores machine (provisoires)
Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.
Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.
score_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découleClassification
machine, non validéePrédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.
Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».