The influence of sampled biomass on species–area relationships of grassland plants
Notice bibliographique
Résumé
Understanding scaling relationships in ecology can foster the development of valuable predictive tools and also pave the ground towards the formulation of better mechanistic models. The species–area relationship (SAR) is a classical example of an empirical relationship between species richness (S) and sampling area (A). This relationship arises from the combined effects of higher detection likelihood due to sampling effects as larger areas are sampled and differential niche effects attributed to the habitat heterogeneity of larger areas (Cam et al., 2002). It has also been argued that SARs could arise from other factors such as dispersal constraints (Rosindell & Cornell, 2007). The SAR is a particularly useful concept in conservation biology as it can provide informative estimates of the recommended size of reserves (e.g. Gitay et al., 1991) but also in extinction ecology where it can be used as a basis to calculate species extinctions following habitat loss (Halley et al., 2013). A frequent issue involving the SAR is how it might be affected by net primary productivity. For annual grasslands sampled biomass (SB) may be a good proxy of net primary productivity but for perennial systems, and particularly those that are dominated by woody plants, the relationship between SB and net primary productivity may be weak. While standing biomass in many cases may be a poor indicator of net primary productivity (for example grasslands may be more productive than forests), for sites sharing comparable seral stages it can still represent a good proxy. For example, intuitively one might expect species richness to increase with SB but there are numerous counter examples such as the tendency for nitrogen enrichment to reduce biodiversity (Stevens et al., 2004) or the low net primary productivity of many rainforest soils following deforestation (Kontowska et al., 2015). While cross-habitat heterogeneity may occasionally compromise SARs (Báldi, 2008) there is compelling evidence that combining data from multiple small-scale quadrats yields robust SARs (Harte et al., 1999). In this paper we address the species accumulation curves of (typically nested) sample areas. Collecting data to fit SAR can be an exceptionally laborious task and it is often the synthesis of existing studies that permits comparison across sites. Sólymos & Lele (2012) synthesized existing data to estimate a mean power-law slope (z) of 0.205 and an intercept (c) for 1 km2 plots of 3.209 (c. 25 plants per km2) for vascular plants, globally. However these estimates may vary considerably across different systems. Pastor et al. (1996) fitted Arrhenius-relationship parameters (as power law scaling factors) to nested quadrats in six grassland plots in Minnesota finding that zeta parameters declined with SB whereas c parameters increased. To the best of our knowledge relationships between SAR parameters and SB have not been tested anywhere else. Fraser et al. (2015) established a global network of 30 grassland sites in 19 countries to study SB–diversity relationships. Analysis of their 157 grids each consisting of 64 1 m × 1 m quadrats within an 8 m × 8 m area revealed humped overall SB–diversity relationships at 1, 2, 4, 9, 16, 25 and 64 m2 scales, but explanatory power of SB diminished with increasing scale. However, the way species–area parameters scale with environmental factors can be counterintuitive; for example when the relationship between richness and productivity within sites is negative but the more productive sites host richer species assemblages (Scheiner et al., 2000). The unique dataset of Fraser et al. (2015) offers great opportunities to better understand SARs. We reanalyzed the dataset to assess the way SAR parameters scale with SB. We expected that at high SB plants compete for a single resource (light) instead of nutrients and water and this would lead to competitive exclusion of rare taxa (Stevens et al., 2004). We thus hypothesized a monotonic negative response of z0 (maximum slope) with SB. We further hypothesized that higher SB would increase c (intercept) as was shown by Pastor et al. (1996). We first assessed a global curvature constant, η through combining local curvature information across all grids (Harte et al., 2009). To estimate independently the parameters z0 and c for each grid we assembled virtual quadrats continuous in space of desired sizes through combining data from the 1 × 1 m2 quadrats (Harte et al., 1999). We used for this purpose 100 bootstrap replicates of each of the quadrat sizes (1, 2, 4, 8, 16, 32 m2) and recorded the two parameters through fitting two nonlinear models that combined all grid data following a log–log transformation with richness as a response variable and area as a predictor (Methods S1). To assess the way the parameters z0 and c varied with SB across sites we first fitted for each parameter a mixed-effects linear model (site was used as a random effects factor) with and without quadratic terms. For the parameter c the quadratic term (as well as the linear) was significant and we further fitted a segmented regression and assessed significance of the two resulting line segments (before and after the breakpoint). To assess the way the two parameters varied with SB within sites, we paired grids within sites and identified log-response ratios (RR) of biomass, zeta parameter estimates and c parameter estimates. A tendency of the RR for either parameter to obtain bigger values when the SB RR was larger would manifest as a positive relationship of within-site SB and the parameter and vice versa. Before fitting any models we transformed our data to meet the assumptions of homoscedasticity and normality. Our mean z0 value of 0.485 was higher than that reported for plants in Sólymos & Lele (2012). Our c value for 1–m2 plots was 3.34. The parameter z0 was monotonically positively influenced by SB (Fig. 1a). By contrast, we detected a negative relationship between SB and c. When we added to this model quadratic terms both linear and quadratic terms were significant and the model became more parsimonious based on Akaike Information Criterion estimates. We further explored this relationship with segmented regression. The breakpoint of the segmented regression was for an SB of c. 292 g m−2. Both the mixed effect linear models for the SB gradient above and below the breakpoint were significant suggesting that the parameter c increases with SB up to an optimal level of SB but then declines (Figs 1b, S1). Within-site comparisons of response ratios of SB vs z0 were significant (r = 0.49, P < 0.001; Fig. 1c). We also found significance for within-site comparisons of RR of SB vs c but this time the relationship was negative (τ = −0.24, P = 0.002, Figs 1d, S3). Detailed statistics for the tests are provided in Methods S1. Our results support the idea of a humped relationship between the parameter c and SB gradients across sites but a negative relationship within sites. Observed differences on the effect of SB on c between and within sites may relate to the fact that the SB differences within sites were considerably smaller or resulted from within-site differences in biotic and abiotic parameters being less pronounced than between-sites. Alternatively SB may only promote c values over a narrow range of low-SB systems; in our within-sites analysis these SB sites did not cluster with each other and these effects were masked by the considerably more numerous higher SB sites. The nonmonotonic relationship we detected with regards to z0 is incongruent with our hypotheses. The positive relationships (within and between sites) with regards to the parameter z0 were also inconsistent with the existing literature and our hypotheses. When projecting our SAR estimates in agreement with the literature (Gillman & Wright, 2006; Fraser et al., 2015) we find humped-shaped SB–diversity relations for small grassland plots with a trend towards producing positive relations for large-grassland areas (Figs S2, S4). How could our results be informative from a policy-making perspective? It has been argued that a high parameter z reflects a greater number of endemic or geographically limited species (Harte & Kinzig, 1997). Because most grassland species have wide geographic distributions, it is the geographically-limited species that are of high conservation priority. Thus, contrary to intuition, conserving high-SB grasslands might optimize our conservation strategy. In fact, if realized species richness declines after some threshold of SB (e.g. Fraser et al., 2015) then conservation efficiency could rely on a tradeoff between the higher probability of encountering rare taxa in productive sites and the high realized species richness of intermediate SB sites. The SLOSS controversy (Single Large Or Several Small; Wilson & Willis, 1975) asks whether it is better to invest in numerous small reserves or a large one of equivalent size. Our analysis suggests that conservationists should stratify grassland habitats based on their SB and disperse their conservation efforts to representative habitats across these strata. Assessing the effect of environmental variables on the scaling parameters of SAR offers a contrasting approach to traditional correlational ecology perspectives on the assembly of plant communities. SB appears to be a key determining factor of the value of the power-law exponent of such relationships and should be considered in future studies. Testing relationships with other environmental variables may represent a promising avenue of further advancing ecology. S.D.V. conceived the project and S.D.V. and J.M.H. carried out the analysis. S.D.V. and J.M.H. wrote the manuscript with the help of M.C.R. and L.H.F. Please note: Wiley Blackwell are not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing material) should be directed to the New Phytologist Central Office. Fig. S1 Exploratory analysis of square transformed parameter c. Fig. S2 Projected productivity–diversity relationships. Fig. S3 Exploratory analysis of square root transformed parameter z0. Fig. S4 Estimated values for the c parameter compared to observed richness values. Methods S1 Detailed description of the materials and methods used for the analysis and statistics on the models used. Please note: The publisher is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.
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Comment cette classification a été obtenuedéplier
Prédiction machine sur la base complète
Imitation des enseignantsNi prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.
Scores du classifieur distillé par catégorie (deux têtes)
| Catégorie | Codex | Gemma |
|---|---|---|
| Métarecherche | 0,006 | 0,028 |
| Méta-épidémiologie (sens strict) | 0,000 | 0,000 |
| Méta-épidémiologie (sens large) | 0,001 | 0,001 |
| Bibliométrie | 0,001 | 0,001 |
| Études des sciences et des technologies | 0,001 | 0,001 |
| Communication savante | 0,001 | 0,001 |
| Science ouverte | 0,001 | 0,001 |
| Intégrité de la recherche | 0,001 | 0,000 |
| Charge utile insuffisante (le modèle a refusé de juger) | 0,002 | 0,001 |
Scores machine (provisoires)
Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.
Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.
score_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découleClassification
machine, non validéePrédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.
Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».