MétaCan
Menu
Retour à la cohorte
Enregistrement W2544931850

Enteropathogenic Escherichia coli (EPEC) causing microvillus damage in weaned pigs

2006· article· en· W2544931850 sur OpenAlexaboutno aff
A. Malik, István Tóth, Péter Zs. Fekete, Lothar Beutin, Béla Nagy

Notice bibliographique

RevueOpenAgrar · 2006
Typearticle
Langueen
DomaineBiochemistry, Genetics and Molecular Biology
ThématiqueEscherichia coli research studies
Établissements canadiensnon disponible
Organismes subventionnairesnon disponible
Mots-clésIntiminEnteropathogenic Escherichia coliBiologyMicrobiologyEnterocyteBacterial outer membraneEscherichia coliShiga toxinPathogenicity islandVirulenceVirologyBacteriaEnterobacteriaceaeGeneSmall intestineGenetics
DOInon disponible

Résumé

récupéré en direct d'OpenAlex

The authors give an overview of the enteropathogenic Escherichia coli (EPEC) strains mainly causing severe diarrhea of children (earlier named dyspepsia of newborn) under one year of age. At present these diseases occur mainly in some developing countries. By the year 1980, it has been widely accepted that infections caused by enteropathogenic E. coli (EPEQ are characterised by the formation of attaching and effacing (AE) lesions on intestinal epithelial cells, L e. by the intimate attachment of the bacteria to the enterocyte membrane and by the effacement of the microvilli. In this regard, they are similar to the enterohaemorrhagic E. coli (EHEC) strains, which produce additionally toxins (with synonymic designation of Vero- or Shiga-toxins), thereby inhibiting protein synthesis of the host cells. Most of the genes of EPEC and EHEC, required for the formation of the AE lesion are clustered on a chromosomal pathogenicity island called the locus of enterocyte effacement (LEE) (Figure 3). The middle part of the LEE contains two genes (eae and tir) that are involved in intimate adhesion, which is followed by reorganisation of the cytoskeletal actin underneath the adherent bacteria and by AE lesion formation (Figure 1. and Figure 2a, b). The eae (intimin) gene encodes for a 94-97 kDa outer membrane protein, which is required for intimate adherence and AE lesion development. Today at least 10 different types of intimin have been defined (from eae-alpha to eae-theta). The receptor for intimin is produced by the EPEC bacteria in form of the "translocated intimin receptor" (Tir), and is injected into the host cell by components of Type III secretion system, acting as a molecular syringe (Figure 4). In case of the typical EPEC strains, this multistep process is initiated by the binding of boundle forming pili (BFP) to the intestinal microvilli (Figure 1). Production BFP is governed by the EPEC adhesion factor (EAF) plasmid. EPEC infections producing AE lesion have been described among several species of domestic animals but an unequivocal pathologic significance have been described only in case of rabbit EPEC. Few data are available regarding occurrence and pathogenetic significance of EPEC in pigs. The authors briefly report on the literature data regarding porcine EPEC, including their recently published (23), and so far unpublished, results. As a first step, a collection of 204 Austrian and 220 Hungarian hemolytic E. coli isolates from diarrhoeal suckling and weaned pigs was investigated for the presence of eae gene by polymerase chain reaction (PCR). Results were negative for eae in all cases, but an overwhelming majority of the strains proved to be enterotoxigenic E. coli (ETEC), or verotoxigenic E. coli (VTEC). In order to explore further the genetic and phenotypic characteristics of porcine eae(+) E. coli, a case-control study was performed. This second study aimed to compare serotypes and intimin types of eae(+) E. coli strains in healthy and diarrhoeal weaned pigs based on intestinal and faecal samples collected from 13 farms, regardless of their haernolytic character. Detection of the eae gene was performed on E coli strains, isolated from 221 diarrhoeal and clinically healthy weaned pigs. As a result, 37 intestinal and fecal EPEC strains were isolated representing 13% of the pigs regardless of clinical picture. Only 3 of these 37 strains were hemolytic. They were characterized by eae-beta intimin gene (85% of intestinal and 53% of fecal strains). Interestingly, the dominant Hungarian type was the O123:H11, eae-beta which was not reported earlier. Besides, there were strains of typical porcine (045) and of other (049, 028, 0108) EPEC serogroups. The eae-gamma type strains were more frequently (23%) isolated from fecal samples, indicating that the preferential site of colonization by these eae-gamma type strains may be different from those of eae-beta strains. Based on the genomic analysis of strains by pulse field electrophoresis (PFGE) the strains of serogroup 0108 could be clearly distinguished. Besides, there were two, genetically distinct subgroups (Canadian and Hungarian) of the two major serogroups 045 and 0123 (Figure 5). in conclusion, the porcine EPEC strains studied can be distinguished from the typical human EPEC strains as atypical EPEC, of which the dominant serotype O123:H11: eae-beta was first detected here. It seems that the intimin types of porcine atypical EPEC may differ according to the intestinal or rectal site of isolation. Results on PFGE analysis also bear an international relevance by indicating that PFGE is useful for identifying genomic subtypes of the same porcine EPEC serotypes, similarly to that of 0157 EHEC strains

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,000
score de la tête « metaresearch » (Gemma)0,000
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Expérimental (laboratoire) · Signal consensuel: Expérimental (laboratoire)
GenreSignal candidat: Empirique · Signal consensuel: Empirique
Score de désaccord entre enseignants0,539
Score d'incertitude au seuil0,854

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0000,000
Méta-épidémiologie (sens strict)0,0000,000
Méta-épidémiologie (sens large)0,0000,000
Bibliométrie0,0000,000
Études des sciences et des technologies0,0000,000
Communication savante0,0000,000
Science ouverte0,0000,000
Intégrité de la recherche0,0000,000
Charge utile insuffisante (le modèle a refusé de juger)0,0000,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,009
Tête enseignante GPT0,250
Écart entre enseignants0,241 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule tête enseignante, pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeExpérimental (laboratoire)
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations0
Publié2006
Routes d'admission1
Résumé présentoui

Explorer davantage

Même revueOpenAgrarMême sujetEscherichia coli research studiesTravaux en français237 207