MétaCan
Menu
Retour à la cohorte
Enregistrement W2802122900 · doi:10.1210/en.2018-00292

Response to Letter to the Editor: “Dubious Conclusions on TSPO Function”

2018· letter· en· W2802122900 sur OpenAlexaff
Jinjiang Fan, Barry R. Zirkin, Vassilios Papadopoulos

Notice bibliographique

RevueEndocrinology · 2018
Typeletter
Langueen
DomaineBiochemistry, Genetics and Molecular Biology
ThématiqueMetabolomics and Mass Spectrometry Studies
Établissements canadiensMcGill University Health Centre
Organismes subventionnairesnon disponible
Mots-clésInternal medicineEndocrinologyFunction (biology)MedicineBiologyGenetics

Résumé

récupéré en direct d'OpenAlex

As they did in response to our recent studies of Tspo conditional knockout mice, which provided evidence that TSPO plays an important role in steroidogenesis (1), Selvaraj and Stocco (2) commented negatively on our studies of CRISPR/Cas9-mediated Tspo mutant cell lines (3). That our results differ from theirs, however, does not make ours, or theirs, “dubious.” Selvaraj and Stocco reported in Tu et al. (4) that CRISPR/Cas9-mediated Tspo deletion had no impact on steroidogenesis in MA-10 cells. In contrast, we reported decreases in both steroidogenic function and mitochondrial membrane potential (Δψm) in two Tspo mutant cell lines (3). Selvaraj and Stocco (2) commented that our study “lacks appropriate controls and leads to erroneous conclusions.” We used the original wild-type (WT) MA-10 cells, and the selected WT cells as experimental controls so that there would be internal controls that went through the same selection process as the Tspo mutants (3). This was not done by Selvaraj and Stocco, perhaps leading to their negative results (4). We also performed transient (overnight) expression of the relevant plasmids to avoid any nonspecific plasmid genome integration (3). Results were obtained from positively selected cells from the CRISPR/Cas9-transfected cell pools. Selvaraj and Stocco used the original MA-10 cells as controls and apparently missed an appropriate control for their Tspo mutant cells with a WT genotype under the same condition(s) (4). Had they looked critically at their own studies and claims, they might have avoided their failure to detect TSPO in H295R adrenal cells, a finding that became central to their dismissal of the role of TSPO in steroidogenesis (5) but one that was disproved by three independent laboratories, including our own (6–8). We do appreciate the comment on the desirability of rescue experiments in knockout studies. There is no widely accepted approach by which to do this, but it now should be technically feasible to use CRISPR/Cas9-mediated correction of a genome mutation. The criticism that we “neglected to cite or discuss” previous work by Selvaraj and Stocco is not true (2). In our article, we presented and discussed seven of their most relevant studies as well as conflicting data from other laboratories (3). We chose to not refer to the 2016 Tu et al. (9) article. It was not our intent to “disregard current literature” in doing so (3). The article in question is based on cell lines sharing the same responses to PK 11195. Thus, any further reference would be meaningless. It should be pointed out that the results in this article are in contrast with the authors’ own previous study on the issue of Δψm (10). In these studies, the authors failed to explain how it is possible that TSPO deficiency in poor-in-TSPO fibroblasts had a dramatic effect on mitochondrial function (10) but that TSPO deficiency in rich-in-TSPO steroidogenic cells did not affect mitochondrial function (9). We were unable to understand and could not explain these results. Consequently, we were unable to relate the results presented in Tu et al. (9) to ours or to other studies in the literature. It also is not true that “the fundamental premise underlying a mitochondrial import function for TSPO is baseless” or that “all positive results specific to TSPO involvement in mitochondrial cholesterol import,” and thus steroid formation, “were reported only by [the Papadopoulos] group.” Surely, Selvaraj and Stocco know that in addition to Papadopoulos’s work, two independent laboratories provided evidence for the role of TSPO in cholesterol import for steroidogenesis (11, 12) and that another laboratory showed the use of lipoprotein-bound cholesterol in TSPO-mediated steroid formation (13). In addition, work from our laboratory and numerous others documented increased steroid production by steroid-synthesizing cells and tissues in response to TSPO drug ligands both in vitro and in vivo (see previously published reviews). We also demonstrated that TSPO has a cholesterol-interacting domain that binds cholesterol. This too has been confirmed by others (14, 15). TSPO has been shown to possess multiple functions likely linked to its mitochondrial location and ability to bind cholesterol. Given these features, TSPO affects mitochondrial membrane fluidity/permeability, membrane protein/transporter functions, and other proteins involved in steroidogenesis leading to TSPO-mediated regulation of Δψm (3). The latter could be a key basic role of TSPO across different cell types. We reported that TSPO-mediated Δψm regulates the mitochondrial import of steroidogenic acute regulatory protein (3) and likely other mitochondrial proteins as reported by other group(s) (16). There is no “TSPO impasse” but rather differences in results that cannot be dismissed by referring to them as “dubious” simply because they are not in agreement with what one wishes the scientific community to believe. wild-type mitochondrial membrane potential Disclosure Summary: The authors have nothing to disclose.

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction machine sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.

score de la tête « metaresearch » (Codex)0,003
score de la tête « metaresearch » (Gemma)0,027
Version: metacan-v3-hybrid-931329e0061cStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Sans objet · Signal consensuel: Sans objet
GenreSignal candidat: Commentaire · Signal consensuel: Commentaire
Score de désaccord entre enseignants0,036
Score d'incertitude au seuil0,029

Scores du classifieur distillé par catégorie (deux têtes)

CatégorieCodexGemma
Métarecherche0,0030,027
Méta-épidémiologie (sens strict)0,0010,001
Méta-épidémiologie (sens large)0,0020,001
Bibliométrie0,0010,001
Études des sciences et des technologies0,0040,003
Communication savante0,0040,003
Science ouverte0,0020,001
Intégrité de la recherche0,0360,040
Charge utile insuffisante (le modèle a refusé de juger)0,0060,007

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,011
Tête enseignante GPT0,258
Écart entre enseignants0,247 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeSans objet
Domainenon disponible
GenreCommentaire

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations5
Publié2018
Routes d'admission1
Résumé présentnon

Explorer davantage

Même revueEndocrinologyMême sujetMetabolomics and Mass Spectrometry StudiesTravaux en français237 207