A prospective study of BRAF and K-ras mutations in colorectal polyps: location, histologic subtype and clinical relevance
Notice bibliographique
Résumé
388 Colorectal cancer (CRC) is a leading cause of cancer mortality and is considered a heterogenous disease. The majority of CRCs arise sporadically through the accumulation of genetic alterations and clonal expansion. Approximately 15% of sporadic CRC exhibit high-level microsatellite instability (MSI-H) and are frequently associated with the CpG island methylation phenotype (CIMP). The initiation and progression of sporadic MSI-H cancers is less well understood and may evolve from hyperplastic polyps (HPs). Previously, hyperplastic polyps as opposed to adenomas were considered to have little or no malignant potential, but this view is being increasingly challenged. It has been proposed that a subset of HPs predispose to sporadic MSI-H cancers and progress through an alternate serrated neoplastic pathway involving oncogenic BRAF (V600E) mutation. Recently oncogenic BRAF mutations have been identified in hyperplastic polyps, serrated adenomas (SA) and carcinomas of the colorectum. Both BRAF and K-ras are involved in the MAP kinase signalling pathway, which influences cell differentiation, proliferation, survival and apoptosis. Activation of this pathway may be an early event in the development of sporadic MSI-H cancers from a specific subset of HPs. In this study we investigated prevalence, location, size, and mutation of BRAF and K-ras in all colorectal polyps obtained from an unselected series of colonoscopies. Two hundred patients were recruited for this study and of these 151 had polyps. All polyps were removed and 99% were retrieved for histology and further analysis. 449 polyps from 146 patients were classified by a single pathologist and further analysed for BRAF and K-ras mutations. Polyps were classified as HPs either of goblet cell (GC) or microvesicular (MV) sub-type, serrated adenomas (SAs), sessile serrated adenomas (SSAs), mixed polyps (MPs), tubular adenomas (TAs) and tubulovillous adenomas (TVAs). Polyps were screened for A1796 activating BRAF mutations (V600E) and K-ras codon 12 and 13 mutations using both an allele-specific real-time PCR assay and Sequenom MassARRAY assay. Of these 32% were HPs (consisting of 19% GC and 13% MV sub-type), 1% SAs, 1.5% MPs, 12% SSAs, 50 % TAs and 4% TVAs. The majority of GC- and MV- HPs were distal in location compared with SSAs, SAs and MPs which were mainly proximally located. In SSAs, SAs and MPs BRAF mutations were more highly represented (79%), whereas K-ras mutations were uncommoon (8%). Conversely, BRAF mutation was extremely rare in TAs and TVAs (0.6%). In conclusion the high prevalence of BRAF mutation in proximal serrated polyps (SSAs, SAs and MPs) provides further support for the serrated neoplastic pathway in the development of sporadic MSI-H colorectal cancer.
Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.
Comment cette classification a été obtenuedéplier
Prédiction machine sur la base complète
Imitation des enseignantsNi prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.
Scores du classifieur distillé par catégorie (deux têtes)
| Catégorie | Codex | Gemma |
|---|---|---|
| Métarecherche | 0,000 | 0,002 |
| Méta-épidémiologie (sens strict) | 0,000 | 0,001 |
| Méta-épidémiologie (sens large) | 0,000 | 0,000 |
| Bibliométrie | 0,001 | 0,001 |
| Études des sciences et des technologies | 0,000 | 0,000 |
| Communication savante | 0,000 | 0,001 |
| Science ouverte | 0,000 | 0,000 |
| Intégrité de la recherche | 0,001 | 0,001 |
| Charge utile insuffisante (le modèle a refusé de juger) | 0,002 | 0,001 |
Scores machine (provisoires)
Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.
Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.
score_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découleClassification
machine, non validéePrédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.
Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».