TNFAIP8 is a central regulator of intestinal homeostasis and regeneration
Notice bibliographique
Résumé
Background After injury, intestinal epithelial cells can regenerate the epithelium and stem cell niche by de‐differentiating through a process recently defined as paligenosis. In the intestine, this process is marked by the YAP‐dependent‐induction of Sca‐1 + /Clu + regenerative stem cells, but other signaling pathways that regulate this regenerative program are unknown. Here we show that the protein TNFAIP8 (aka TIPE0) is a critical regulator of intestinal homeostasis and functions through the inhibition of basal microbiome‐dependent PI3K/Akt signaling. Results Loss of TIPE0 results in hyperactivation of the Akt pathway, leading to resistance to ischemia/reperfusion (Fig ) and radiation‐induced injuries. Similar results were recapitulated with enteroid cultures exposed to TNF or hypoxic conditions (Fig ). However, when the epithelium was disrupted through chemical means, the intestine was unable to regenerate. The loss of TNFAIP8 resulted in a baseline shift to more partially differentiated enterocytes (Fig ), with inappropriate baseline activation of the Sca‐1 + /Clu + regenerative program, but a lack of appropriate YAP/Sca‐1/Clu induction after injury (Fig ). Subsequent cellular signaling analysis demonstrated that PI3K/Akt signaling was enhanced upon loss of TIPE0 (Fig by IHC in mice, Fig in freshly isolated epithelium, and Fig in enteroid culture) and that this was responsible both for the resistance to injury and lack of regenerative function. TIPE0 was found to regulate PI3K/Akt signaling by extracting PIP from the plasma membrane, limiting the availability of PI3K to convert Ptdlns(4,5)P 2 to PIP 3 under basal conditions. Conclusions TNFAIP8 is a critical regulator of PI3K/Akt signaling, inhibiting commensal microbial stimulation by extracting Ptdlns(4,5)P 2 from the plasma membrane and inhibiting PIP 3 accumulation. TIPE0 is needed for intestinal homeostasis, and loss results in hyperactivation of PI3K/Akt‐mediated signaling, leading to altered differentiation as well as an inability to respond injury, with a gut that fails to regenerate but also resists some injuries. Support or Funding Information R01‐AI121166, R01‐AI136945, and R56‐AI132329 to Y.H.C.; grant F32‐DK116528 to J.R.G.; and grant P30‐DK050306 to Anil Rustgi. J.R.G was partially supported by NIH‐T32‐CA009140. TIPE0 controls intestinal injury responses and differentiation. A) Histological score of mice subjected to 60′ of ischemia and 90′ of reperfusion, with accompanying histology (B). Cell titer glo 3D assays were used to determine 1‐day survival of 7d old enteroids exposed to 100 ng/mL TNF (C) or hypoxic conditions (1% O 2 , D). Sc‐RNA‐Seq shows changes in enterocyte populations with loss of TIPE0 (E&F). G) The Sca‐1 + injury response program does not induce after injury with loss of TIPE0. Figure 1 Loss of TIPE0 results in basal increases in pAkt signaling. IHC staining for A) pAktS473, B) GSK3βS9, and C) β‐catenin in WT and Tipe0 − / − ileums with and without ischemia. D) Western blot of enterocytes isolated from healthy ileums. E) IF staining for pAktS473 and β‐catenin in 7d‐old enteroids. Figure 2
Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.
Comment cette classification a été obtenuedéplier
Prédiction machine sur la base complète
Imitation des enseignantsNi prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.
Scores du classifieur distillé par catégorie (deux têtes)
| Catégorie | Codex | Gemma |
|---|---|---|
| Métarecherche | 0,000 | 0,000 |
| Méta-épidémiologie (sens strict) | 0,000 | 0,000 |
| Méta-épidémiologie (sens large) | 0,000 | 0,000 |
| Bibliométrie | 0,000 | 0,000 |
| Études des sciences et des technologies | 0,000 | 0,000 |
| Communication savante | 0,001 | 0,000 |
| Science ouverte | 0,000 | 0,000 |
| Intégrité de la recherche | 0,000 | 0,001 |
| Charge utile insuffisante (le modèle a refusé de juger) | 0,002 | 0,001 |
Scores machine (provisoires)
Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.
Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.
score_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découleClassification
machine, non validéePrédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.
Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».