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Enregistrement W3096388455 · doi:10.1016/j.ebiom.2020.103090

Predicting outcomes in COVID-19: From internal validation to improving care

2020· letter· en· W3096388455 sur OpenAlexaff
Ryeyan Taseen, André M. Cantin

Notice bibliographique

RevueEBioMedicine · 2020
Typeletter
Langueen
DomaineMedicine
ThématiqueCOVID-19 and healthcare impacts
Établissements canadiensUniversité de Sherbrooke
Organismes subventionnairesnon disponible
Mots-clésCoronavirus disease 2019 (COVID-19)2019-20 coronavirus outbreakSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)BetacoronavirusCoronavirus InfectionsMEDLINEMedicineVirologyComputer scienceBiologyInternal medicineOutbreakDiseaseInfectious disease (medical specialty)

Résumé

récupéré en direct d'OpenAlex

One of the major challenges in treating patients with COVID-19 is predicting the severity of disease [[1]Richardson S. Hirsch J.S. Narasimhan M. Crawford J.M. McGinn T. Davidson K.W. et al.Presenting Characteristics, Comorbidities, and Outcomes Among 5700 Patients Hospitalized With COVID-19 in the New York City Area.JAMA. 2020; 323: 2052-2059Crossref PubMed Scopus (6118) Google Scholar]. In the context of a healthcare system stretched to capacity, the identification of factors associated with outcomes in COVID-19 is critically important [[2]Yadaw A.S. Li Y.C. Bose S. Iyengar R. Bunyavanich S. Pandey G Clinical features of COVID-19 mortality: development and validation of a clinical prediction model.Lancet Digit Health. 2020; 2: e516-ee25Summary Full Text Full Text PDF PubMed Scopus (161) Google Scholar]. Initially, COVID-19 was thought to be associated with a cytokine storm [[3]Feldmann M. Maini R.N. Woody J.N. Holgate S.T. Winter G. Rowland M. et al.Trials of anti-tumour necrosis factor therapy for COVID-19 are urgently needed.Lancet. 2020; 395: 1407-1409Summary Full Text Full Text PDF PubMed Scopus (422) Google Scholar]. Subsequently, cytokines and particularly IL-6 have attracted much attention as potential outcome biomarkers. However, it has been relatively difficult to consistently link poor clinical outcomes with baseline plasma concentrations of IL-6. A recent report indicates that IL-6 and IL-8 levels in critically ill patients with COVID-19 are considerably lower than in those with septic shock with or without the acute respiratory distress syndrome (ARDS) [[4]Kox M. Waalders N.J.B. Kooistra E.J. Gerretsen J. Pickkers P Cytokine Levels in Critically Ill Patients With COVID-19 and Other Conditions.JAMA. 2020; Crossref PubMed Scopus (228) Google Scholar]. Measures of individual cytokines at initial presentation may thus provide limited information on the clinical course of COVID-19. An alternative approach would be to study a composite cytokine profile and its change over the course of disease. In this issue of EBioMedicine, McElvaney and colleagues [[5]McElvaney O.J. Hobbs D.B. Qiao D. McElvaney O.F. Moll M. McEvoy N.L. et al.A linear prognostic score based on the ratio of interleukin-6 to interleukin-10 predicts outcomes in COVID-19.EBioMedicine. 2020; https://doi.org/10.1016/j.ebiom.2020.103026Summary Full Text Full Text PDF PubMed Scopus (54) Google Scholar] propose a new tool to aid in predicting the clinical outcome of patients hospitalized with COVID-19 based on the change observed over 4 days of the cytokine ratio of IL-6 to IL-10. The Dublin-Boston score is a 5-point scale, based on this change observed in 80 patients hospitalized with a confirmed diagnosis of COVID-19. Although baseline IL-6 was weakly associated with clinical outcome, the change in IL-6:IL-10 over time, particularly after 4 days, proved to be a far better predictor of outcome. In terms of prognostic research, this is a model development and internal validation study for the Dublin-Boston score [[6]Altman D.G. Vergouwe Y. Royston P. Moons K.G Prognosis and prognostic research: validating a prognostic model.BMJ. 2009; 338: b605Crossref PubMed Scopus (988) Google Scholar]. An exciting contribution of the study is identifying a new prognostic factor and demonstrating its superiority over IL-6. If the IL-6:IL-10 ratio is confirmed in a broader study population to have significant prognostic value, it can be widely used for prediction models related to COVID-19 and, perhaps, as a biomarker of treatment response. The predicted outcome of the Dublin-Boston score is a relative difference in clinical status between day 0 and 7, while the prediction is made using information between day 0 and 4. In order to demonstrate that it is potentially useful for clinicians, it is necessary that the predicted outcome not overlap known outcomes. Subsequent studies also need to demonstrate that the use of the model improves clinical decisions over not using the model [[7]Steyerberg E.W. Vickers A.J. Cook N.R. Gerds T. Gonen M. Obuchowski N. et al.Assessing the performance of prediction models: a framework for traditional and novel measures.Epidemiology. 2010; 21: 128-138Crossref PubMed Scopus (2948) Google Scholar]. The very determination of a “declined” or “improved” clinical status in the study hinged on the ability of the existing health care system to identify a change in status and make the appropriate decision to step up or step down care. Ideally, one should demonstrate that the model is [[1]Richardson S. Hirsch J.S. Narasimhan M. Crawford J.M. McGinn T. Davidson K.W. et al.Presenting Characteristics, Comorbidities, and Outcomes Among 5700 Patients Hospitalized With COVID-19 in the New York City Area.JAMA. 2020; 323: 2052-2059Crossref PubMed Scopus (6118) Google Scholar] better at making this assessment than usual parameters such as vital signs, mental status, kidney and liver function, and [[2]Yadaw A.S. Li Y.C. Bose S. Iyengar R. Bunyavanich S. Pandey G Clinical features of COVID-19 mortality: development and validation of a clinical prediction model.Lancet Digit Health. 2020; 2: e516-ee25Summary Full Text Full Text PDF PubMed Scopus (161) Google Scholar] that the clinical application of the model-based tool improves outcomes. It is important to emphasize that the ultimate indicator of a clinical prediction model's worth is its ability to impact care [[8]Moons K.G. Altman D.G. Vergouwe Y. Royston P Prognosis and prognostic research: application and impact of prognostic models in clinical practice.BMJ. 2009; 338: b606Crossref PubMed Scopus (653) Google Scholar]. Consistent with an internal validation study, the excellent performance characteristics of the model in this study should not be used to infer the potential usefulness of the model, only how it performs relative to other models in the same study set. The authors make the interesting comment that the IL-6:IL-10 ratio predicts outcomes but should not necessarily be used as a therapeutic target. There is an increasing awareness that prediction models should not only be predictive of the outcome, but should use predictors where the causal relationships with the outcome are more fully understood [[9]Prosperi M. Guo Y. Sperrin M. Koopman J.S. Min J.S. He X. et al.Causal inference and counterfactual prediciton in machine learning for actionable healthcare.Nature Machine Intel. 2020; 2: 369-375Crossref Scopus (111) Google Scholar]. If the IL-6:IL-10 ratio is not causally responsible for a change in status, then it is possible that unmeasured confounding factors, such as the administration of tocilizumab as highlighted by the authors, can change the observed value in a way that makes model predictions inaccurate. Two questions arise: First, what else has the potential to confound the predictive ability of the IL-6:IL-10 ratio in clinical practice? And second, if the IL-6:IL-10 ratio is not causally related, then what is? The first is the concern of a prediction model researcher who wants to make a useful model while the second is the concern of a basic science researcher who wants to explain the disease and find treatments, but both are fundamentally related. Finally, as more treatments move to the bedside, the Dublin-Boston score or the IL-6:IL-10 ratio could provide a useful tool to monitor response and support decisions to initiate or change therapies. Subsequent validation studies should include sensitivity analyses for patients on new therapies such as high-dose steroids, as is recently indicated for patients with severe and critical COVID-19 [[10]Lamontagne F. Agoritsas T. Macdonald H. Leo Y.S. Diaz J. Agarwal A. et al.A living WHO guideline on drugs for covid-19.BMJ. 2020; 370: m3379Crossref PubMed Scopus (465) Google Scholar]. Overall, the authors make a compelling case for studying composite cytokine profiles as biomarkers for patients with COVID-19. Hopefully, the initial promise of the IL-6:IL-10 ratio evolution will be pursued in subsequent studies to determine its impact on care. A linear prognostic score based on the ratio of interleukin-6 to interleukin-10 predicts outcomes in COVID-19The Dublin-Boston score is easily calculated and can be applied to a spectrum of hospitalized COVID-19 patients. More informed prognosis could help determine when to escalate care, institute or remove mechanical ventilation, or drive considerations for therapies. Full-Text PDF Open Access

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,000
score de la tête « metaresearch » (Gemma)0,006
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesMéta-épidémiologie (sens strict), Intégrité de la recherche
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Sans objet · Signal consensuel: Sans objet
GenreSignal candidat: Commentaire · Signal consensuel: Commentaire
Score de désaccord entre enseignants0,221
Score d'incertitude au seuil1,000

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0000,006
Méta-épidémiologie (sens strict)0,0010,000
Méta-épidémiologie (sens large)0,0010,000
Bibliométrie0,0010,001
Études des sciences et des technologies0,0000,000
Communication savante0,0000,000
Science ouverte0,0000,000
Intégrité de la recherche0,0010,003
Charge utile insuffisante (le modèle a refusé de juger)0,0000,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,059
Tête enseignante GPT0,394
Écart entre enseignants0,334 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule tête enseignante, pas un consensus.

Devis d'étudeSans objet
Domainenon disponible
GenreCommentaire

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations2
Publié2020
Routes d'admission1
Résumé présentoui

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