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Enregistrement W4281690701 · doi:10.1093/jtm/taac072

Potential for monkeypox exportation from West and Central Africa through global travel networks

2022· article· en· W4281690701 sur OpenAlexaffabout
Natalie H. Au, Mariana Torres Portillo, Anindita Marwah, Andrea Thomas-Bachli, P Alex Demarsh, Kamran Khan, Isaac I. Bogoch

Notice bibliographique

RevueJournal of Travel Medicine · 2022
Typearticle
Langueen
DomaineImmunology and Microbiology
ThématiquePoxvirus research and outbreaks
Établissements canadiensUniversity Health NetworkUniversity of TorontoSt. Michael's HospitalBlueDot (Canada)
Organismes subventionnairesnon disponible
Mots-clésMonkeypoxExportationMedicineTravel medicineVirologySocioeconomicsArtificial intelligencePathology

Résumé

récupéré en direct d'OpenAlex

Monkeypox virus (MPV) is a zoonotic pathogen endemic to West and Central Africa.1 A growing number of locally acquired MPV cases, across an expanding number of non-endemic countries, is being reported as of May 2022. Prior exported cases of MPV have resulted in secondary transmission, however these were smaller outbreaks.2 Future outbreaks are likely to increase in frequency and size due to the cessation of smallpox vaccine programs, which confers some cross-protection to MPV, coupled with rising global population mobility.3,4 Here, we identify cities at high risk of MPV importation from endemic regions via commercial air travel. We assessed three scenarios of global spread of MPV, originating from: (i) Nigeria, from which at least one exported case was reported on 7 May 2022 to England; (ii) seven countries where the West African clade MPV is endemic; (iii) six countries where the Central African (Congo Basin) clade MPV is endemic. Endemic countries were identified by cross-referencing reported isolates detailed in a recent review5 to a map of countries with evidence of human cases in the past 10 years (e.g. in medical literature or by a public health organization), as of 2021 (Appendix 1). For countries with reported cases but unknown clade, we assigned a clade based on its proximity to countries with known clades. We assumed the West African clade is endemic in Guinea and Togo and the Central African (Congo Basin) clade is endemic in Central African Republic and Equatorial Guinea.5 For each scenario, we identified the top 20 destination cities using modelled volumes and final destination cities of travellers on commercial flights for May 2022. Traveller volumes were modelled using historical flight itinerary data for February 2022 from the International Air Transport Association (IATA) and scheduled flight itineraries (including airport of origin, destination and flight transfers) for May 2022 from CIRIUM, as February 2022 is the most recent complete dataset for global travel trends. IATA data account for an estimated 90% of global commercial air travel, with the other 10% modelled using market intelligence data. Estimated traveller volumes from flights originating in Nigeria in May 2022 are greatest to London, England (27 547), Dubai (9151) and Johannesburg (5706) (Table 1). Countries reporting human cases of West African clade MPV have greatest traveller volumes to London (37 650), Paris (23 801) and Dubai (17 385), whereas countries endemic for Congo Basin clade MPV have the greatest volumes to Paris (16 954), Brussels (6459) and Johannesburg (5749) (Table 1). For reference, May 2019 traveller volumes from these regions can be viewed in Appendix 2. Top 20 cities with the largest modelled air passenger volumes on flights for May 2022 originating from: (1) Nigeria; (2) countries where West African clade MPV is endemic; (3) countries where Central African (Congo Basin) clade MPV is endemic Based on a review by Alakunle et al.5, West African clade MPV is endemic in: Guinea (assumed based on geographic proximity), Sierra Leone, Liberia, Cote D’Ivoire, Ghana, Togo (assumed based on geographic proximity) and Nigeria. Central African (Congo Basin) clade MPV is endemic in: Cameroon, Central African Republic (assumed based on geographic proximity), Equatorial Guinea (assumed based on geographic proximity), Gabon, Democratic Republic of Congo and Republic of Congo. Large European cities such as London and Paris are the most likely distant regions for MPV exportation from endemic regions; however, transmission within the African continent to cities such as Johannesburg is also a possibility. If unrecognized, MPV infections can spread to others, triggering local outbreaks. Limitations of this analysis include assigning clades by geographic proximity where information was not available. In addition, our analysis assumes a homogeneous risk of MPV infection in endemic countries and equal opportunities for populations in these countries to travel internationally. Supporting endemic countries to rapidly identify and effectively manage monkeypox outbreaks is important for local and global control efforts, and may have secondary benefits in mitigating the risk of other emerging pathogens with epidemic or pandemic potential. Such support could include strengthening laboratory capacity and increasing timely access to smallpox vaccination for close contacts. This analysis also identifies non-endemic areas of the world at risk for MPV importation, where heightened awareness by frontline healthcare providers could increase early identification of cases, with timely implementation of appropriate infection control precautions that disrupt further chains of transmission. I.I.B. has consulted to BlueDot (a social benefit company that tracks emerging infectious diseases) and the NHL Players’ Association. K.K. is the founder and CEO of BlueDot. I.I.B., A.T.B., P.A.D. and K.K. conceived the idea N.H.A., M.T.P., A.M., I.I.B. conducted data collection and analysis. All authors contributed to the interpretation and writing of the manuscript. Grants or Other Financial Support: IIB is supported by the Canadian Institutes for Health Research.

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,000
score de la tête « metaresearch » (Gemma)0,000
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Observationnel · Signal consensuel: aucune
GenreSignal candidat: Empirique · Signal consensuel: Empirique
Score de désaccord entre enseignants0,798
Score d'incertitude au seuil0,930

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0000,000
Méta-épidémiologie (sens strict)0,0000,000
Méta-épidémiologie (sens large)0,0000,000
Bibliométrie0,0000,000
Études des sciences et des technologies0,0000,000
Communication savante0,0000,000
Science ouverte0,0000,000
Intégrité de la recherche0,0000,000
Charge utile insuffisante (le modèle a refusé de juger)0,0010,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,021
Tête enseignante GPT0,275
Écart entre enseignants0,255 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule tête enseignante, pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeObservationnel
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations17
Publié2022
Routes d'admission2
Résumé présentoui

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