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Enregistrement W4310774259 · doi:10.1093/stmcls/sxac084

In Reply: Revisiting Claims of the Continued Absence of Functional Germline Stem Cells in Adult Ovaries

2022· letter· en· W4310774259 sur OpenAlexafffundabout
Masahito Yoshihara, Magdalena Wagner, Anastasios Damdimopoulos, Cheng Zhao, Sophie Petropoulos, Shintaro Katayama, Juha Kere, Fredrik Lanner, Pauliina Damdimopoulou

Notice bibliographique

RevueStem Cells · 2022
Typeletter
Langueen
DomaineMedicine
ThématiqueReproductive Biology and Fertility
Établissements canadiensUniversité de MontréalCentre Hospitalier de l’Université de Montréal
Organismes subventionnairesJapan Society for the Promotion of ScienceCanadian Institutes of Health ResearchSigrid Juséliuksen SäätiöAstellas Foundation for Research on Metabolic DisordersVetenskapsrådetSvenska Sällskapet för Medicinsk ForskningSvenska Forskningsrådet FormasAstellas PharmaGreat Britain Sasakawa FoundationJapan Eye Bank AssociationEye Bank Association of America
Mots-clésBiologyGermlineStem cellGeneticsCell biologyGene

Résumé

récupéré en direct d'OpenAlex

In their Letter to the Editor, Woods and Tilly1 repeat their concerns2 about our research on DDX4 antibody positive cells (DDX4 Ab+) isolated from adult human ovarian cortex.3,4 We show that these cells are perivascular cells instead of so-called oogonial stem cells (OSC), and hence recommend researchers working on the topic to be cautious if following the protocol developed by Tilly and co-workers.5 As we have responded to these concerns previously,6 we will keep our response short. For example, we already extensively addressed the issues related to cell numbers and viability, evolution of bioinformatic tools, and detection of ovarian cell types by scRNA-seq.6 As Woods and Tilly wrote1, there have been 3 clinical trials where women have been subjected to the AUGMENT treatment.7-9 A piece of their ovaries was surgically removed and dissociated into single cells for isolation of DDX4 Ab+ cells. Then, mitochondria were isolated and stored for simultaneous injection with sperm into oocytes collected from the same women during a regular ovarian hyperstimulation cycle.10 As we have previously highlighted, the only blinded randomized controlled trial was terminated prematurely due to a significantly lower rate of blastocyst formation in the AUGMENT therapy group.8 The shortcomings of the other two trials have been raised and discussed elsewhere.8,11 Our studies add concerns about the nature of the DDX4 Ab+ cells that were used for mitochondrial isolation. Our first single-cell transcriptomic analysis of the DDX4 Ab+ cells was published in 2015.4 Among the top genes expressed in the DDX4 Ab+ cells, two well-known perivascular cell markers, ACTA2 and TAGLN, were found.4 Further, we have already shown that these cells keep their perivascular gene expression profile even when cultured for extended time under OSC conditions.3 Hence, in contrast to what Woods and Tilly suggest, the data sets we presented in 2015 and 2020 are not in disagreement with each other but instead unequivocally support our conclusions. Woods and Tilly point to 9 rodent studies as evidence showing that DDX4 Ab+ cell-derived oocytes can give rise to viable offspring. However, the majority of these studies did not use DDX4 Ab for cell isolation from ovaries but rather other markers (Ifitm3) or GFP expression in the germline. When DDX4 Ab was used, the DDX4 Ab+ cells were not been systematically compared to DDX4 Ab− cells, which is troublesome, knowing the unspecific nature of this antibody,3,6 and as such the studies do not help to answer the claims of DDX4 Ab+ cells being germline stem cells. We notice that the hypothesis that Tilly and his co-workers presented earlier regarding accidental sorting of perivascular cells based on autofluorescence in our laboratory2 was not repeated in the current letter,1 suggesting that the new data we presented cleared that concern.6 In closing, the data presented by Woods and Tilly to support the hypothesis that DDX4 Ab+ cells are germline stem cells continue to have significant gaps. Our results demonstrate that the use of the recommended Abcam rabbit polyclonal Ab toward DDX4 for the isolation human of germline stem cells5 instead leads to the isolation of perivascular cells.3,6 As such, we continue to encourage researchers working with the protocol to thoroughly characterize the DDX4 Ab+ cells and their derivatives, with DDX Ab− cells as controls, using single–cell technologies in combination with functional studies. The authors received funding from Astellas Foundation for Research on Metabolic Disorders, Childhood Cancer Fund (PR2020-0096), Horizon 2020 innovation grant (ERIN, grant no. EU952516), Jane & Aatos Erkko Foundation, Japan Eye Bank Association, Japan Society for the Promotion of Science (JSPS) Overseas Research Fellowships, Scandinavia-Japan Sasakawa Foundation, Sigrid Jusélius Foundation, Swedish Research Council for Sustainable Development FORMAS (2020-01621), Svenska Sällskapet för Medicinsk Forskning (4-236-2107), The Canadian Institutes of Health Research (PJT-178082), and Swedish Research Council (2016-01919, 2020-02132). SP holds the Canada Research Chair in Functional Genomics of Reproduction and Development (950-233204). The authors declared no potential conflicts of interest. No new data were generated or analyzed in support of this research.

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,001
score de la tête « metaresearch » (Gemma)0,000
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Sans objet · Signal consensuel: Sans objet
GenreSignal candidat: Empirique · Signal consensuel: Empirique
Score de désaccord entre enseignants0,116
Score d'incertitude au seuil0,756

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0010,000
Méta-épidémiologie (sens strict)0,0000,000
Méta-épidémiologie (sens large)0,0010,000
Bibliométrie0,0000,000
Études des sciences et des technologies0,0000,000
Communication savante0,0000,000
Science ouverte0,0000,000
Intégrité de la recherche0,0000,002
Charge utile insuffisante (le modèle a refusé de juger)0,0000,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,022
Tête enseignante GPT0,243
Écart entre enseignants0,221 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule tête enseignante, pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeSans objet
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations1
Publié2022
Routes d'admission3
Résumé présentoui

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