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Enregistrement W4381429499 · doi:10.1016/j.ostima.2023.100101

NEURAL SHAPE MODELS ENCODE BONE SHAPE FEATURES NOT CAPTURED BY STATISTICAL SHAPE MODELS

2023· article· en· W4381429499 sur OpenAlexfundno aff
Anthony A. Gatti, Feliks Kogan, Garry E. Gold, Scott L. Delp, Akshay Chaudhari

Notice bibliographique

RevueOsteoarthritis Imaging · 2023
Typearticle
Langueen
DomaineMedicine
ThématiqueBone health and osteoporosis research
Établissements canadiensnon disponible
Organismes subventionnairesCanadian Institutes of Health ResearchNational Institutes of Health
Mots-clésPattern recognition (psychology)Standard deviationArtificial intelligenceMathematicsSagittal planeFemurShape analysis (program analysis)Computer scienceMedicineStatisticsAnatomy

Résumé

récupéré en direct d'OpenAlex

The recently proposed B-Score uses statistical shape models (SSM) to represent femur shape as a scalar value similar to the osteoporosis T-score. The B-Score quantifies OA bone shape and is defined as the distance from the mean healthy bone shape (B-Score=0) to the mean OA bone shape, where 1-unit is equal to the standard deviation of the healthy B-Scores [Bowes et al. 2021]. However, SSMs require finding matching points between subjects’ femurs, and learn linear features, potentially limiting their ability to capture physiologic shape. Neural Shape Models (NSM) have been shown to represent object surfaces without requiring matching points between subjects using non-linear neural networks. Here, we use NSMs to reconstruct bone shapes and use these features to encode information about OA. To compare B-Scores learned from a NSM and a SSM. Data from the 24 and 48-month visit of the right knee of 562 participants enrolled in the OAI were included (335 females, mean age 63.5(8.9) years, BMI 30.8(4.8) kg/m2, and KLG counts of 0=35, 1=79, 2=269, 3=167, 4=12). Fig 1 depicts the data analysis pipeline; sagittal DESS MRIs were segmented using a CNN and femur surfaces were extracted using marching cubes. The NSM and SSM models were fit to the 24-month data of half the subjects. The NSM and SSM learned feature spaces were 256 and 90 dimensions, respectively. Fitted models were used to obtain shape features from the 48-month data of all subjects. Finally, NSM and SSM B-scores were computed to assess how the NSM and SSM feature spaces affect the learned B-scores. To determine whether each model has the capacity to represent the other's B-Score, the amount of variance in the B-Score explained by the feature space of the other model was calculated using linear regression. Since the B-Score produces a range of scores within each KL grade, the distribution of B-Scores per KLG were plotted. The odds ratios (OR) for knee pain and TKA were computed between B-Score quartiles (1 vs 2, 3, 4) in OA knees (KLG >=2). Pain was defined using previous criteria [Morales et al. 2021]. The NSM explained 82% of the variance in SSM B-score, yet the SSM only explained 55% of the variance in NSM B-score (Fig 2). Fig 3 shows the distribution of B-Scores per KLG demonstrating that within a KLG there is a range of B-Scores providing more specific shape information. Table 1 includes ORs for pain and TKA between quartile 1 and all other quartiles for both B-scores. The NSM learned non-linear shape features that encode clinically relevant information about OA without a need to find matching points between subjects. The NSM and SSM performed similarly for predicting clinical outcomes. The NSM had a broader range of B-scores between KLGs primarily driven by a large difference between KLG 0 and 1, potentially indicating greater expressivity for the NSM. The SSM did a poor job predicting the NSM B-score, which was particularly evident in KLG 0 knees where the SSM was unable to reproduce NSM B-Scores in the healthy range (Fig 2). Small samples of KLG 0 and 4 knees likely limit both SSM and NSM B-Scores. More data from the OAI will likely enable the more flexible NSM to learn more expressive representations particularly in under-represented sub-samples, like KLG 4 knees. Results from this study indicate that the NSM captures novel bone shape information that cannot be learned by the SSM.

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,001
score de la tête « metaresearch » (Gemma)0,000
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesMéta-épidémiologie (sens strict)
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Simulation ou modélisation · Signal consensuel: aucune
GenreSignal candidat: Empirique · Signal consensuel: Empirique
Score de désaccord entre enseignants0,979
Score d'incertitude au seuil1,000

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0010,000
Méta-épidémiologie (sens strict)0,0010,001
Méta-épidémiologie (sens large)0,0010,000
Bibliométrie0,0000,001
Études des sciences et des technologies0,0000,000
Communication savante0,0000,001
Science ouverte0,0000,000
Intégrité de la recherche0,0000,001
Charge utile insuffisante (le modèle a refusé de juger)0,0010,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,031
Tête enseignante GPT0,314
Écart entre enseignants0,283 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule tête enseignante, pas un consensus.

Devis d'étudeSimulation ou modélisation
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations1
Publié2023
Routes d'admission1
Résumé présentoui

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