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Enregistrement W4405043136 · doi:10.1182/blood-2024-209623

Integrating the Sunnybrook Biobank into the Future of Healthcare - Exploring Patient and Healthworker Biobanking Perspectives

2024· article· en· W4405043136 sur OpenAlexaffabout
Noor Kundu, Dylan Gowlett-Park, August Lin, Sila Usta, Tina Khazaee, Katarina Czibere, Alexandra Misura, Olga Bigun, Betty Wong, Samuel Matsumura, Hubert Tsui, Signy Chow

Notice bibliographique

RevueBlood · 2024
Typearticle
Langueen
DomaineMedicine
ThématiqueEthics in Clinical Research
Établissements canadiensHealth Sciences CentreUniversity of TorontoWestern UniversitySunnybrook Health Science Centre
Organismes subventionnairesnon disponible
Mots-clésBiobankMedicineHealth careMEDLINEBioinformaticsBiology

Résumé

récupéré en direct d'OpenAlex

Background The large scale collection of biological samples through biobanking generates an important resource for scientific research and personalized medicine. Excellent annotation of clinical samples is essential for researchers to assign clinical significance to their findings in both common and rare conditions. The practice of biobanking comes with ethical/medicolegal questions related to informed consent, control of samples, incidental findings, and withdrawal of consent. The success of biobanking is dependent on institutional support and the trust and goodwill of participants. Public awareness of the risks to personal information is increasing due to high profile data breaches. Present-day challenges with regards to digital privacy may influence potential participants' willingness to donate samples. . The Sunnybrook Hematology Biobank, “the Biobank”, has collected blood and bone marrow samples from patients with acute leukemia, myelodysplastic syndrome, myeloproliferative neoplasms and other hematologic disorders. The Biobank has collected over 800 samples from more than 600 patients since inception in 2021. To improve our practices, we conducted a survey of patients who had participated in biobanking (BB), patients who had not participated (NB), and health care workers/researchers (HCW) at Sunnybrook Health Sciences Centre in Toronto, Canada. Methods Survey questions were designed around themes of knowledge and support for biobanking, privacy and control, and trust. BB patients were given additional questions around their experiences. Similarly, HCW were given questions regarding integration of biobanking practices into their clinical practice. Responses were graded on a likert scale. The survey was conducted online through REDCap or through paper forms. The study was approved by the local Research Ethics Board and supported by an internal institutional grant. BB participants were contacted by telephone, NB participants were approached in clinic waiting rooms and online surveys for HCW were distributed through institutional email. Results 126 HCW, 101 NB, and 100 BB participants completed surveys. 59% of HCW, 35% of NB participants, and 75% of BB participants believed they had a good understanding of what biobanking is. The majority of respondents supported biobanking (96% HCW, 89% NB, 96% BB) and believed that more resources should be devoted to creating biobanks. Top concerns with regard to sample donation included concerns over genetic information used to re-identify participants for exclusionary purposes, for profit companies using their samples, and research being conducted that respondents may not agree with. NB participants had high levels of trust in Sunnybrook physicians (93%), hospital/government institutions and charitable foundations and less trust in insurance companies (9%) and for profit companies (13%) 77% of BB participants felt that the consent discussion provided them with sufficient understanding regarding biobank participation while 22% responded neutrally. 53% of NB and BB participants felt that they should be able to select which types of research their samples could be used for, and 82% of participants felt their healthcare experience would be made more meaningful by having donated. 52% of HCW were willing to adjust their workflow to support biobanking and 39% were neutral. In solicited open comments, the predominant theme amongst HCW was concern regarding potential non-use of biobanked samples. Discussion/Conclusion Overall, the majority of respondents supported biobanking and agreed that biobanking practices are important for research objectives. Respondents also felt a sense of meaning by participating in biobanking. Respondents indicated that they desired some control over the type of research that their samples were used for, and concern regarding privacy breaches was present to a lesser extent. Current BB participants reported high levels of comfort with the consent discussion, though a 22% neutral response leaves room for future improvement. An emerging theme from HCW participants was the desire for transparency and accountability as to the proper use of collected samples. These results will inform future practices to improve our consenting process, integrate sample collection and consent with clinical practices and provide transparency as to the research being conducted with biobanked samples.

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction machine sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.

score de la tête « metaresearch » (Codex)0,021
score de la tête « metaresearch » (Gemma)0,018
Version: metacan-v3-hybrid-931329e0061cStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Qualitatif · Signal consensuel: Qualitatif
GenreSignal candidat: Empirique · Signal consensuel: aucune
Score de désaccord entre enseignants0,215
Score d'incertitude au seuil0,428

Scores du classifieur distillé par catégorie (deux têtes)

CatégorieCodexGemma
Métarecherche0,0210,018
Méta-épidémiologie (sens strict)0,0000,000
Méta-épidémiologie (sens large)0,0000,000
Bibliométrie0,0010,002
Études des sciences et des technologies0,0190,011
Communication savante0,0180,008
Science ouverte0,0020,010
Intégrité de la recherche0,0020,003
Charge utile insuffisante (le modèle a refusé de juger)0,0090,001

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,227
Tête enseignante GPT0,485
Écart entre enseignants0,258 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeQualitatif
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations1
Publié2024
Routes d'admission2
Résumé présentoui

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