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Enregistrement W6920544223 · doi:10.60692/d843h-3wh17

Trafficking Defects of a Novel Autosomal Recessive Distal Renal Tubular Acidosis Mutant (S773P) of the Human Kidney Anion Exchanger (kAE1)

2004· article· en· W6920544223 sur OpenAlexaff

Notice bibliographique

RevueGreater South Information System · 2004
Typearticle
Langueen
DomaineBiochemistry, Genetics and Molecular Biology
ThématiqueIon Transport and Channel Regulation
Établissements canadiensUniversity of TorontoCanadian Institutes of Health Research
Organismes subventionnairesnon disponible
Mots-clésMutantDistal renal tubular acidosisRenal tubular acidosisEndoplasmic reticulumMutationMissense mutationKidneyHEK 293 cells

Résumé

récupéré en direct d'OpenAlex

Autosomal dominant and recessive distal renal tubular acidosis (dRTA) can be caused by mutations in the anion exchanger 1 (AE1 or SLC4A1) gene, which encodes the erythroid chloride/bicarbonate anion exchanger membrane glycoprotein (eAE1) and a truncated kidney isoform (kAE1). The biosynthesis and trafficking of kAE1 containing a novel recessive missense dRTA mutation (kAE1 S773P) was studied in transiently transfected HEK-293 cells, expressing the mutant alone or in combination with wild-type kAE1 or another recessive mutant, kAE1 G701D. The kAE1 S773P mutant was expressed at a three times lower level than wild-type, had a 2-fold decrease in its half-life, and was targeted for degradation by the proteasome. It could not be detected at the plasma membrane in human embryonic kidney cells and showed predominant endoplasmic reticulum immunolocalization in both human embryonic kidney and LLC-PK1 cells. The oligosaccharide on a kAE1 S773P N-glycosylation mutant (N555) was not processed to the complex form indicating impaired exit from the endoplasmic reticulum. The kAE1 S773P mutant showed decreased binding to an inhibitor affinity resin and increased sensitivity to proteases, suggesting that it was not properly folded. The other recessive dRTA mutant, kAE1 G701D, also exhibited defective trafficking to the plasma membrane. The recessive kAE1 mutants formed dimers like wild-type AE1 and could hetero-oligomerize with wild-type kAE1 or with each other. Hetero-oligomers of wild-type kAE1 with recessive kAE1 S773P or G701D, in contrast to the dominant kAE1 R589H mutant, were delivered to the plasma membrane. Autosomal dominant and recessive distal renal tubular acidosis (dRTA) can be caused by mutations in the anion exchanger 1 (AE1 or SLC4A1) gene, which encodes the erythroid chloride/bicarbonate anion exchanger membrane glycoprotein (eAE1) and a truncated kidney isoform (kAE1). The biosynthesis and trafficking of kAE1 containing a novel recessive missense dRTA mutation (kAE1 S773P) was studied in transiently transfected HEK-293 cells, expressing the mutant alone or in combination with wild-type kAE1 or another recessive mutant, kAE1 G701D. The kAE1 S773P mutant was expressed at a three times lower level than wild-type, had a 2-fold decrease in its half-life, and was targeted for degradation by the proteasome. It could not be detected at the plasma membrane in human embryonic kidney cells and showed predominant endoplasmic reticulum immunolocalization in both human embryonic kidney and LLC-PK1 cells. The oligosaccharide on a kAE1 S773P N-glycosylation mutant (N555) was not processed to the complex form indicating impaired exit from the endoplasmic reticulum. The kAE1 S773P mutant showed decreased binding to an inhibitor affinity resin and increased sensitivity to proteases, suggesting that it was not properly folded. The other recessive dRTA mutant, kAE1 G701D, also exhibited defective trafficking to the plasma membrane. The recessive kAE1 mutants formed dimers like wild-type AE1 and could hetero-oligomerize with wild-type kAE1 or with each other. Hetero-oligomers of wild-type kAE1 with recessive kAE1 S773P or G701D, in contrast to the dominant kAE1 R589H mutant, were delivered to the plasma membrane. The kidney plays an essential role in maintaining the acid-base balance of the body by reabsorbing bicarbonate in the proximal tubule and secreting acid into the urine. Impairment in acid secretion by α-intercalated cells of the distal nephron leads to the development of distal renal tubular acidosis (dRTA), 1The abbreviations used are: dRTA, distal renal tubular acidosis; AD dRTA, autosomal dominant distal renal tubular acidosis; AE, anion exchanger; AR dRTA, autosomal recessive dRTA; C12E8, octaethylene glycol mono-n-dodecyl ether; endo H, endoglycosidase H; GPA, glycophorin A; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; H2DIDS, 4,4′-diisothiocyanato-2,2′-dihydrostilbene disulfonate; HEK, human embryonic kidney; kAE1, kidney isoform of anion exchanger 1; kAE1 His, kAE1 with C-terminal His6 tag; LLC-PK1 cell, porcine kidney epithelial cells; MDCK, Madin-Darby canine kidney; PBS, phosphate-buffered saline; PFO, perfluoro-octanoic acid; PMSF, phenylmethylsulfonyl fluoride; SITS, 4-acetamido-4′-isothiocyanostilbene-2,2′-disulfonate; ER, endoplasmic reticulum; DMEM, Dulbecco's modified Eagle's medium; SAO, Southeast Asian ovalocytosis; HA, hemagglutinin; WT, wild type. 1The abbreviations used are: dRTA, distal renal tubular acidosis; AD dRTA, autosomal dominant distal renal tubular acidosis; AE, anion exchanger; AR dRTA, autosomal recessive dRTA; C12E8, octaethylene glycol mono-n-dodecyl ether; endo H, endoglycosidase H; GPA, glycophorin A; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; H2DIDS, 4,4′-diisothiocyanato-2,2′-dihydrostilbene disulfonate; HEK, human embryonic kidney; kAE1, kidney isoform of anion exchanger 1; kAE1 His, kAE1 with C-terminal His6 tag; LLC-PK1 cell, porcine kidney epithelial cells; MDCK, Madin-Darby canine kidney; PBS, phosphate-buffered saline; PFO, perfluoro-octanoic acid; PMSF, phenylmethylsulfonyl fluoride; SITS, 4-acetamido-4′-isothiocyanostilbene-2,2′-disulfonate; ER, endoplasmic reticulum; DMEM, Dulbecco's modified Eagle's medium; SAO, Southeast Asian ovalocytosis; HA, hemagglutinin; WT, wild type. which is inherited in both an autosomal dominant (AD dRTA) (1Karet F.E. Gainza F.J. Gyory A.Z. Unwin R.J. Wrong O. Tanner M.J.A. Nayir A. Alpay H. Santos F. Hulton S.A. Bakkaloglu A. Ozen S. Cunningham M.J. di Pietro A. Walker W.G. Lifton R.P. Proc. Natl. Acad. Sci. U. S. A. 1998; 95: 6337-6342Crossref PubMed Scopus (230) Google Scholar, 2Bruce L.J. Cope D.L. Jones G.K. Schofield A.E. Burley M. Povey S. Unwin R.J. Wrong O. Tanner M.J. J. Clin. Invest. 1997; 100: 1693-1707Crossref PubMed Scopus (306) Google Scholar, 3Jarolim P. Shayakul C. Prabakaran D. Jiang L. Stuart-Tilley A. Rubin H.L. Simova S. Zavadil J. Herrin J.T. Brouillette J. Somers M.J. Seemanova E. Brugnara C. Guay-Woodford L.M. Alper S.L. J. Biol. Chem. 1998; 273: 6380-6388Abstract Full Text Full Text PDF PubMed Scopus (170) Google Scholar, 4Bruce L.J. Wrong O. Toye A.M. Young M.T. Ogle G. Ismail Z. Sinha A.K. McMaster P. Hwaihwanje I. Nash G.B. Hart S. Lavu E. Palmer R. Othman A. Unwin R.J. Tanner M.J.A. Biochem. J. 2000; 350: 41-51Crossref PubMed Scopus (154) Google Scholar, 5Rysava R. Tesar V. Jirsa Jr., M. Brabec V. Jarolim P. Nephrol. Dial. Transplant. 1997; 12: 1869-1873Crossref PubMed Scopus (49) Google Scholar, 6Cheidde L. Vieira T.C. Lima P.R. Saad S.T. Heilberg I.P. Pediatrics. 2003; 112: 1361-1367Crossref PubMed Scopus (51) Google Scholar, 7Rungroj N. Devonald M.A. Cuthbert A.W. Reimann F. Akkarapatumwong V. Yenchitsomanus P.T. Bennett W.M. Karet F.E. J. Biol. Chem. 2004; 279: 13833-13838Abstract Full Text Full Text PDF PubMed Scopus (79) Google Scholar) and autosomal recessive manner (AR dRTA) (4Bruce L.J. Wrong O. Toye A.M. Young M.T. Ogle G. Ismail Z. Sinha A.K. McMaster P. Hwaihwanje I. Nash G.B. Hart S. Lavu E. Palmer R. Othman A. Unwin R.J. Tanner M.J.A. Biochem. J. 2000; 350: 41-51Crossref PubMed Scopus (154) Google Scholar, 8Tanphaichitr V.S. Sumboonnanonda A. Ideguchi H. Shayakul C. Brugnara C. Takao M. Veerakul G. Alper S.L. J. Clin. Invest. 1998; 102: 2173-2179Crossref PubMed Scopus (154) Google Scholar, 9Vasuvattakul S. Yenchitsomanus P.T. Vachuanichsanong P. Thuwajit P. Kaitwatcharachai C. Laosombat V. Malasit P. Wilairat P. Nimmannit S. Kidney Int. 1999; 56: 1674-1682Abstract Full Text Full Text PDF PubMed Scopus (93) Google Scholar, 10Yenchitsomanus P.T. Vasuvattakul S. Kirdpon S. Wasanawatana S. Susaengrat W. Sreethiphayawan S. Chuawatana D. Mingkum S. Sawasdee N. Thuwajit P. Wilairat P. Malasit P. Nimmannit S. Am. J. Kidney Dis. 2002; 40: 21-29Abstract Full Text Full Text PDF PubMed Scopus (40) Google Scholar). Patients with AD dRTA usually remain asymptomatic until adulthood, whereas AR dRTA patients are severe cases and early onset (11Karet F.E. Finberg K.E. Nelson R.D. Nayir A. Mocan H. Sanjad S.A. Rodriguez-Soriano J. Santos F. Cremers C.W. Di Pietro A. Hoffbrand B.I. Winiarski J. Bakkaloglu A. Ozen S. Dusunsel R. Goodyer P. Hulton S.A. Wu D.K. Skvorak A.B. Morton C.C. Cunningham M.J. Jha V. Lifton R.P. Nat. Genet. 1999; 21: 84-90Crossref PubMed Scopus (579) Google Scholar, 12Bajaj G. Quan A. Am. J. Kidney Dis. 1996; 27: 880-882Abstract Full Text PDF PubMed Scopus (22) Google Scholar, 13Bentur L. Alon U. Mandel H. Pery M. Berant M. Am. J. Nephrol. 1989; 9: 470-474Crossref PubMed Scopus (16) Google Scholar). Recently, a number of missense, nonsense, and deletion mutations in the anion exchanger 1 (AE1 or SLC4A1) gene resulting in both AD and AR dRTA have been identified and characterized (1Karet F.E. Gainza F.J. Gyory A.Z. Unwin R.J. Wrong O. Tanner M.J.A. Nayir A. Alpay H. Santos F. Hulton S.A. Bakkaloglu A. Ozen S. Cunningham M.J. di Pietro A. Walker W.G. Lifton R.P. Proc. Natl. Acad. Sci. U. S. A. 1998; 95: 6337-6342Crossref PubMed Scopus (230) Google Scholar, 2Bruce L.J. Cope D.L. Jones G.K. Schofield A.E. Burley M. Povey S. Unwin R.J. Wrong O. Tanner M.J. J. Clin. Invest. 1997; 100: 1693-1707Crossref PubMed Scopus (306) Google Scholar, 3Jarolim P. Shayakul C. Prabakaran D. Jiang L. Stuart-Tilley A. Rubin H.L. Simova S. Zavadil J. Herrin J.T. Brouillette J. Somers M.J. Seemanova E. Brugnara C. Guay-Woodford L.M. Alper S.L. J. Biol. Chem. 1998; 273: 6380-6388Abstract Full Text Full Text PDF PubMed Scopus (170) Google Scholar, 4Bruce L.J. Wrong O. Toye A.M. Young M.T. Ogle G. Ismail Z. Sinha A.K. McMaster P. Hwaihwanje I. Nash G.B. Hart S. Lavu E. Palmer R. Othman A. Unwin R.J. Tanner M.J.A. Biochem. J. 2000; 350: 41-51Crossref PubMed Scopus (154) Google Scholar, 5Rysava R. Tesar V. Jirsa Jr., M. Brabec V. Jarolim P. Nephrol. Dial. Transplant. 1997; 12: 1869-1873Crossref PubMed Scopus (49) Google Scholar, 6Cheidde L. Vieira T.C. Lima P.R. Saad S.T. Heilberg I.P. Pediatrics. 2003; 112: 1361-1367Cr

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,000
score de la tête « metaresearch » (Gemma)0,000
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Expérimental (laboratoire) · Signal consensuel: Expérimental (laboratoire)
GenreSignal candidat: Empirique · Signal consensuel: Empirique
Score de désaccord entre enseignants0,070
Score d'incertitude au seuil0,425

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0000,000
Méta-épidémiologie (sens strict)0,0000,000
Méta-épidémiologie (sens large)0,0000,000
Bibliométrie0,0000,000
Études des sciences et des technologies0,0000,000
Communication savante0,0000,000
Science ouverte0,0000,000
Intégrité de la recherche0,0000,000
Charge utile insuffisante (le modèle a refusé de juger)0,0000,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,016
Tête enseignante GPT0,205
Écart entre enseignants0,189 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule tête enseignante, pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeExpérimental (laboratoire)
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations0
Publié2004
Routes d'admission1
Résumé présentoui

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