A Role for Epsin N-terminal Homology/AP180 N-terminal Homology (ENTH/ANTH) Domains in Tubulin Binding
Notice bibliographique
Résumé
The epsin N-terminal homology (ENTH) domain is a protein module of ∼150 amino acids found at the N terminus of a variety of proteins identified in yeast, plants, nematode, frog, and mammals. ENTH domains comprise multiple α-helices folded upon each other to form a compact globular structure that has been implicated in interactions with lipids and proteins. In characterizing this evolutionarily conserved domain, we isolated and identified tubulin as an ENTH domain-binding partner. The interaction, which is direct and has a dissociation constant of ∼1 μm, was observed with ENTH domains of proteins present in various species. Tubulin is co-immunoprecipitated from rat brain extracts with the ENTH domain-containing proteins, epsins 1 and 2, and punctate epsin staining is observed along the microtubule cytoskeleton of dissociated cortical neurons. Consistent with a role in microtubule processes, the over-expression of epsin ENTH domain in PC12 cells stimulates neurite outgrowth. These data demonstrate an evolutionarily conserved property of ENTH domains to interact with tubulin and microtubules. The epsin N-terminal homology (ENTH) domain is a protein module of ∼150 amino acids found at the N terminus of a variety of proteins identified in yeast, plants, nematode, frog, and mammals. ENTH domains comprise multiple α-helices folded upon each other to form a compact globular structure that has been implicated in interactions with lipids and proteins. In characterizing this evolutionarily conserved domain, we isolated and identified tubulin as an ENTH domain-binding partner. The interaction, which is direct and has a dissociation constant of ∼1 μm, was observed with ENTH domains of proteins present in various species. Tubulin is co-immunoprecipitated from rat brain extracts with the ENTH domain-containing proteins, epsins 1 and 2, and punctate epsin staining is observed along the microtubule cytoskeleton of dissociated cortical neurons. Consistent with a role in microtubule processes, the over-expression of epsin ENTH domain in PC12 cells stimulates neurite outgrowth. These data demonstrate an evolutionarily conserved property of ENTH domains to interact with tubulin and microtubules. The epsin N-terminal homology (ENTH) 1The abbreviations used are: ENTH, epsin N-terminal homology; ANTH, AP180 N-terminal homology; E/ANTH, epsin/AP180 N-terminal homology; DH, Dbl homology; GFP, green fluorescent protein; GST, glutathione S-transferase; HIP, Huntingtin-interacting protein; MAP, microtubule-associated protein; MES, 4-morpholineethanesulfonic acid; MP90, mitotic phosphoprotein of 90 kDa; PH, pleckstrin homology; PIPES, 1,4-piperazinediethanesulfonic acid; PtdIns(4,5)P2, phosphatidylinositol 4,5-bisphosphate; SH3, Src homology 3; TRITC, tetramethylrhodamine isothiocyanate. domain is an evolutionarily conserved globular module of ∼150 amino acids that occurs at the amino terminus of a variety of proteins (1Kay B.K. Yamabhai M. Wendland B. Emr S.D. Protein Sci. 1999; 8: 435-438Crossref PubMed Scopus (102) Google Scholar, 2Chen H. Fre S. Slepnev V.I. Capua M.R. Takei K. Butler M.H. Di Fiore P.P. De Camilli P. Nature. 1998; 394: 793-797Crossref PubMed Scopus (273) Google Scholar). Originally noted in the plant protein, Af10 (3Jones H.D. Smith S.J. Desikan R. Plakidou-Dymock S. Lovegrove A. Hooley R. Plant Cell. 1998; 10: 245-254Crossref PubMed Scopus (113) Google Scholar), the ENTH domain has subsequently been characterized in epsins (2Chen H. Fre S. Slepnev V.I. Capua M.R. Takei K. Butler M.H. Di Fiore P.P. De Camilli P. Nature. 1998; 394: 793-797Crossref PubMed Scopus (273) Google Scholar) and enthoprotin (4Wasiak S. Legendre-Guillemin V. Puertollano R. Blondeau F. Girard M. de Heuvel E. Boismenu D. Bell A.W. Bonifacino J.S. McPherson P.S. J. Cell Biol. 2002; 158: 855-862Crossref PubMed Scopus (167) Google Scholar) (also termed epsinR (5Hirst J. Motley A. Harasaki K. Peak Chew S.Y. Robinson M.S. 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Adaptor protein 180 (AP180), clathrin assembly lymphoid myeloid leukemia protein (CALM), Huntingtin-interacting protein-1 (HIP1) and HIP12, and the yeast proteins yAP180 and Sla2p contain a module that is so similar in structure to the epsin ENTH domain that they were initially denoted ENTH-bearing proteins (11Hyman J. Chen H. Di Fiore P.P. De Camilli P. Brunger A.T. J. Cell Biol. 2000; 149: 537-546Crossref PubMed Scopus (146) Google Scholar, 12Itoh T. Koshiba S. Kigawa T. Kikuchi A. Yokoyama S. Takenawa T. Science. 2001; 291: 1047-1051Crossref PubMed Scopus (392) Google Scholar, 13Ford M.G. Pearse B.M. Higgins M.K. Vallis Y. Owen D.J. Gibson A. Hopkins C.R. Evans P.R. McMahon H.T. Science. 2001; 291: 1051-1055Crossref PubMed Scopus (611) Google Scholar). However, recent structural studies have refined our understanding such that ENTH-like domains from these proteins have been re-designated ANTH domain-containing proteins in accordance with their higher structural similarity to AP180 rather than epsin (14Ford M.G. Mills I.G. Peter B.J. Vallis Y. Praefcke G.J. Evans P.R. McMahon H.T. Nature. 2002; 419: 361-366Crossref PubMed Scopus (811) Google Scholar). In an effort to simplify the nomenclature applied in this study, we refer to these homologous structures as E/ANTH domains when collectively discussing proteins bearing either domain, but maintain the ENTH or ANTH nomenclature when discussing individual proteins. A common feature among many E/ANTH domain-bearing proteins is that their C termini contain peptide motifs, indicative of a functional role in clathrin-mediated membrane budding including clathrin and clathrin adaptor protein-binding elements (1Kay B.K. Yamabhai M. Wendland B. Emr S.D. 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Cell Biol. 2003; 160: 213-222Crossref PubMed Scopus (204) Google Scholar, 7Kalthoff C. Groos S. Kohl R. Mahrhold S. Ungewickell E.J. Mol. Biol. Cell. 2002; 13: 4060-4073Crossref PubMed Scopus (106) Google Scholar, 10Duncan M.C. Costaguta G. Payne G.S. Nat. Cell Biol. 2003; 5: 77-81Crossref PubMed Scopus (83) Google Scholar). Recent studies have demonstrated that the E/ANTH domains of epsin and AP180 can mediate lipid binding, particularly to phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2), and that this interaction is required for efficient clathrin-mediated endocytosis i
Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.
Comment cette classification a été obtenuedéplier
Prédiction machine sur la base complète
Imitation des enseignantsNi prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.
Scores du classifieur distillé par catégorie (deux têtes)
| Catégorie | Codex | Gemma |
|---|---|---|
| Métarecherche | 0,000 | 0,000 |
| Méta-épidémiologie (sens strict) | 0,000 | 0,000 |
| Méta-épidémiologie (sens large) | 0,000 | 0,000 |
| Bibliométrie | 0,000 | 0,000 |
| Études des sciences et des technologies | 0,000 | 0,000 |
| Communication savante | 0,000 | 0,000 |
| Science ouverte | 0,000 | 0,000 |
| Intégrité de la recherche | 0,000 | 0,000 |
| Charge utile insuffisante (le modèle a refusé de juger) | 0,001 | 0,000 |
Scores machine (provisoires)
Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.
Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.
score_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découleClassification
machine, non validéePrédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.
Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».