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Enregistrement W7037702130

Elucidating pathogenesis and improving clinical management of benign cutaneous inflammation in urticaria and malignant inflammation in cutaneous T-cell lymphomas

2017· dissertation· en· W7037702130 sur OpenAlexaff

Notice bibliographique

RevueeScholarship@McGill (McGill) · 2017
Typedissertation
Langueen
DomaineAgricultural and Biological Sciences
ThématiqueEntomological Studies and Ecology
Établissements canadiensMcGill University
Organismes subventionnairesnon disponible
Mots-clésPathogenesisInflammationDegranulationDiseaseMycosis fungoidesChronic urticariaCD63Basophil activation
DOInon disponible

Résumé

récupéré en direct d'OpenAlex

Introduction: Chronic urticaria (CU) is defined when hives occur for at least 6 weeks. When no identifiable cause can be found, it is classified as chronic spontaneous urticaria (CSU). Approximately 50% of patients are now considered to have an autoimmune etiology which can be established in vivo with the use of the autologous serum skin test (ASST) or in vitro with the Basophil Activation Test (BAT) measuring CD63 expression. Because of its chronicity, CU in children results in substantial impairment of health-related quality of life (QoL). While urticaria represents benign inflammation, Cutaneous T-Cell Lymphomas (CTCL) represents malignant inflammation that is driven by neoplastic CD4+ T cells in the skin. About 20% of patients with early stage will progress and succumb to their disease. Currently, it is not possible to predict which patients will progress. It is also challenging to diagnose CTCL as it mimics benign inflammatory dermatoses. It may be possible to identify a set of molecular markers that may be used to help prognosticate and diagnose this disease. Methods: We have created a cohort of 139 children affected by CSU. All patients were followed for 2 years. We have studied the utility of BAT to help diagnose and monitor response to treatment, evaluated the natural history and assessed for predictors of disease resolution using established validated tools including the weekly urticaria activity score (UAS7) and the Chronic Urticaria quality of life questionnaire (CU-Q2oL). For CTCL research we used the RT-PCR and tested gene expression in 60 CTCL skin biopsy samples and in 11 patient-derived cell lines to discover diagnostic and prognostic markers and to gain additional insight in the molecular etiology of CTCL. We also tested the expression of Embryonic Stem Cell (ESC) genes in this cancer. Results: Based on the log-normal distribution of CD63 values in control subjects, the reference range and the cut-off for positive CD63 BAT values was established to be 1.2% to 1.8% (95%CI) and 1.8%, respectively. Children with CSU showed significantly elevated and significantly more increased BAT values as compared to healthy controls (Wilcoxon rank test p-value <0.001). In contrast, no difference was found between BAT results in controls and PU patients. Higher disease activity and treatment resistance were associated with higher BAT values. Using the BAT we documented that 57% of children in our cohort had autoimmune CSU. The rate of disease resolution was 10.3% per year. Positive BAT and basopenia were statistically associated with earlier disease resolution. CU-Q2oL at time of recruitment suggested that itch, sleep impairment and physical appearance were the most important factors affecting QoL. The mean UAS7 at first follow up was 8.23 and reduced to 3.62 on next follow up suggesting an overall good control of symptoms with current management strategies.Our research findings on CTCL demonstrated that 17 genes (CCL18, CCL26, FYB, T3JAM, MMP12, LEF1, LCK, ITK, GNLY, IL2RA, IL26, IL22, CCR4, GTSF1, SYCP1, STAT5A, and TOX) are able to both identify patients who are at risk of progression and also distinguish CTCL from benign mimickers. Our findings for the first time demonstrated that many critical ESC genes are expressed in CTCL. Select ESC genes (OCT4, EED, TCF3, THAP11, CHD7, TIP60, TRIM28) were preferentially expressed in CTCL samples when compared to benign skin biopsies. Conclusions: Relative frequency of autoimmune urticaria in children is similar to adults and if proven in the future, may be a good prognostic factor predicting earlier disease resolution. BAT may serve as an effective laboratory tool to help diagnose autoimmune CSU and monitor response to treatment in moderate/severe cases.Our gene expression findings in CTCL, combined with other gene expression analyses, prepare the foundation for the development of personalized molecular approach toward diagnosis and prognostication of this cancer.

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,001
score de la tête « metaresearch » (Gemma)0,000
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Observationnel · Signal consensuel: aucune
GenreSignal candidat: Empirique · Signal consensuel: Empirique
Score de désaccord entre enseignants0,895
Score d'incertitude au seuil0,986

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0010,000
Méta-épidémiologie (sens strict)0,0000,000
Méta-épidémiologie (sens large)0,0010,000
Bibliométrie0,0000,000
Études des sciences et des technologies0,0010,000
Communication savante0,0000,000
Science ouverte0,0000,000
Intégrité de la recherche0,0010,000
Charge utile insuffisante (le modèle a refusé de juger)0,0000,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,019
Tête enseignante GPT0,242
Écart entre enseignants0,223 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule tête enseignante, pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeObservationnel
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations0
Publié2017
Routes d'admission1
Résumé présentoui

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