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Record W101195333 · doi:10.1096/fasebj.21.5.a260

Anti‐proliferate Effects of a Marine Macrolide on Cell Cycle Kinetics, Apoptosis, and Gene Expression in LNCaP and PC‐3 Cells

2007· article· en· W101195333 on OpenAlexaff
Wei Lin Winnie Wang, Randy Jeffrey, Peter McHenry, Paul Helquist, Martin Tenniswood

Bibliographic record

VenueThe FASEB Journal · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBiological Research and Disease Studies
Canadian institutionsQueen's University
FundersColeman Foundation
KeywordsLNCaPCell cycleApoptosisCell cycle checkpointCell biologyBiologyChemistryMolecular biologyG1 phaseCancer cellCancer researchCancerBiochemistryGenetics

Abstract

fetched live from OpenAlex

Iejimalide B (IejB) is a marine macrolide produced by Eudistoma cf. rigida, a sea slug living in the waters near the Japanese island, Ie Jima. We are investigating the effects of IejB on cell cycle kinetics and apoptosis, as well as its effect on gene expression in the prostate cancer cell lines, LNCaP and PC‐3 cells. IejB has a dose and time dependent effect on cell number in both PC‐3 and LNCaP cells. In p53‐/AR‐ PC‐3 cells, IejB induces a G1/S phase arrest at 24 h and causes a transition to S phase arrest at later time points. In comparison, IejB induces G0/G1 phase arrest and apoptosis (Apo‐BrdU staining) in the p53+/AR+ LNCaP cells. These data suggest that IejB exerts its effects by initially inhibiting the cell cycle in G0/G1 and subsequently induces S phase arrest by inhibiting DNA synthesis. Since the induction of apoptosis in LNCaP cells occurs without entry into S phase, IejB appears to have two targets within the cell: one at the bifurcation of the cell cycle and apoptotic pathways, and one that inhibits DNA synthesis. Using RT‐PCR we have compared the effects of IejB on mRNA state levels for 50 genes related to cell cycle and apoptosis. The expression profiles in LNCaP and PC‐3 cells are very similar and dose dependent, suggests that the effects of Iejimalide B on transcription are neither p53 nor AR mediated. (Supported by the Coleman Foundation and the Walther Cancer Institute)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.028
Threshold uncertainty score0.244

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.245
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes1
Has abstractyes

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