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Record W1154172980

刺槐Na^+/H^+逆向转运蛋白RpNHX1基因的分离和生物信息学分析

2007· article· zh· W1154172980 on OpenAlexvenueno aff
于学宁, 刘欣玲, 董秀春, 樊金会, 曹帮华

Bibliographic record

Venue分子植物育种 · 2007
Typearticle
Languagezh
FieldAgricultural and Biological Sciences
TopicPlant nutrient uptake and metabolism
Canadian institutionsnot available
Fundersnot available
KeywordsComputer science
DOInot available

Abstract

fetched live from OpenAlex

盐分胁迫严重影响植物生长和产量。为了研究木本植物对盐分的适应性,利用5'RACE技术,从刺槐中克隆得到液泡Na^+/H^+逆向转运蛋白基因RpNHX1。该基因长度为2281bp,含有一个开放阅读框,编码535氨基酸残基组成的蛋白,该蛋白序列与大豆GmNHX1和拟南芥AtNHX1相似,氨基酸的同源性分别达85%和69%,RpNHX1属于NHX亚族的NHX-I分枝。用生物信息学的方法预测RpNHX1具有所有Na^+/H^+逆向转运蛋白共同的结构特点,即含有疏水的N末端,10个跨膜螺旋区域和一个具有调节功能的C端亲水区域,其中氨氯吡嗪咪敏感基序和CaM结合域也是保守的。在4和5的螺旋区域之间,存在有一串带负电荷氨基酸,显示出有规律的排列模式,这些模式在生物界中的Na^+/H^+转运蛋白中是保守的。结合亲疏水资料,我们认为Na^+/H^+转运通道结构可能存在于这一区域。另外,也分析了RpNHX1可能的糖基化、酰基化和磷酸化位点。从这些数据中可以看出,RpNHX1可能在细胞中起到Na^+区隔化作用。

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.010
Threshold uncertainty score0.034

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0020.003
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0100.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.231
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes1
Has abstractyes

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