Parallel and Other Simulations in<i>R</i>Made Easy: An End-to-End Study
Bibliographic record
Abstract
It is shown how to set up, conduct, and analyze large simulation studies with the new R package simsalapar (= simulations simplified and launched parallel). A simulation study typically starts with determining a collection of input variables and their values on which the study depends. Computations are desired for all combinations of these variables. If conducting these computations sequentially is too time-consuming, parallel computing can be applied over all combinations of select variables. The final result object of a simulation study is typically an array. From this array, summary statistics can be derived and presented in terms of flat contingency or LATEX tables or visualized in terms of matrix-like figures. The R package simsalapar provides several tools to achieve the above tasks. Warnings and errors are dealt with correctly, various seeding methods are available, and run time is measured. Furthermore, tools for analyzing the results via tables or graphics are provided. In contrast to rather minimal examples typically found in R packages or vignettes, an end-to-end, not-so-minimal simulation problem from the realm of quantitative risk management is given. The concepts presented and solutions provided by simsalapar may be of interest to students, researchers, and practitioners as a how-to for conducting realistic, large-scale simulation studies in R.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.019 | 0.103 |
| Meta-epidemiology (narrow) | 0.002 | 0.001 |
| Meta-epidemiology (broad) | 0.002 | 0.003 |
| Bibliometrics | 0.001 | 0.002 |
| Science and technology studies | 0.001 | 0.001 |
| Scholarly communication | 0.004 | 0.005 |
| Open science | 0.004 | 0.005 |
| Research integrity | 0.002 | 0.005 |
| Insufficient payload (model declined to judge) | 0.041 | 0.023 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".