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Record W1500703353 · doi:10.1128/9781555817848.ch23

How Noninvasive Pathogens Induce Disease: Lessons from Enteropathogenic and Enterohemorrhagic <i>Escherichia Coli</i>

2014· book-chapter· en· W1500703353 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueASM Press eBooks · 2014
Typebook-chapter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicEscherichia coli research studies
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsEnteropathogenic Escherichia coliMicrobiologyBiologyVirulencePilusPathogenEscherichia coliVirologyGeneGenetics

Abstract

fetched live from OpenAlex

A novel focus of the work has been on defining the molecular and cellular mechanisms underlying the interactions between bacterial pathogens and host cells. During infection, enteropathogenic Escherichia coli (EPEC) and enterohemorrhagic E. coli (EHEC) induce a characteristic “attaching and effacing” (A/E) histopathology on gut enterocytes. Since studies investigating the function of EPEC's virulence factors are the most advanced, this chapter deals with EPEC as the prototype for the family of A/E-inducing pathogens. EPEC infection is estimated to cause the deaths of several hundred thousand children per year owing to dehydration and other complications. First widely recognized as the causative agent of hamburger disease, EHEC is a zoonotic pathogen that appears to be asymptomatically carried by various ruminants. Mutants lacking the bundle-forming pilus (BFP) plasmid still attach to host cells, but do not form microcolonies and produce fewer A/E lesions than wild-type EPEC. Immunofluorescence studies have shown that in addition to membrane-bound Tir, the tips of EPEC pedestals contain predominantly filamentous (F)-actin, as well as talin, α- actinin, ezrin, and several other cytoskeletal proteins. Diarrhea is undoubtedly the most prominent and widespread symptom associated with both EPEC and EHEC infection. Approaches using molecular biology, genetics, and cell biology have provided many new insights into how EPEC and related pathogens interact with and exploit host cells during the course of infection and how this ultimately leads to disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.949
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.250
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it