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Oral polio vaccination failure in urban slum children is associated with malnutrition and evidence of chronic inflammation (166.2)

2012· article· en· W1507173230 on OpenAlexaff
Evan W. Newell, Natalia Sigal, Rashidul Haque, Brian Kidd, Tiffany Tse, William A. Petri, Mark Davis

Bibliographic record

VenueThe Journal of Immunology · 2012
Typearticle
Languageen
FieldMedicine
TopicViral gastroenteritis research and epidemiology
Canadian institutionsInstitute of Infection and Immunity
Fundersnot available
KeywordsMedicineImmunologyVaccinationBreastfeedingMalnutritionPoliomyelitisImmune systemVaccine failureInflammationImmunizationPediatricsInternal medicine

Abstract

fetched live from OpenAlex

Abstract Oral vaccines for polio (OPV) and rotavirus have been shown to be much less effective in poor children in the developing world. The reason(s) for oral vaccine failure in this setting has been unknown. We hypothesized that failure of orally administered vaccines such as OPV was due to tropical enteropathy and resultant inflammation from endotoxin exposure. We tested this hypothesis in a cohort of children followed from birth in an urban slum of Dhaka Bangladesh. Response to oral poliovirus vaccine was measured in the children who received the recommended minimum of three doses of OPV by age 6 months. Diminished antibody responses to OPV were associated with malnutrition, serum endotoxin-specific antibodies, and shorter breastfeeding duration. In a subset of these children, we investigated the mechanism for vaccine failure using a systems-immunology approach, performing comprehensive cellular assays on peripheral blood mononuclear cells, including a single-cell mass-spectrometry based assessment of cellular phenotypes and functional capacities. From this analysis, children with vaccine failure exhibited globally reduced cellular responsiveness to a range of cytokine stimulations, as well as elevated pro-inflammatory cytokine expression. These data indicate that oral vaccine failure in this at-risk group is related to malnutrition, gut barrier dysfunction and shorter duration of breast-feeding in early childhood, and is associated with a chronic inflammatory immune phenotype.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.297
Teacher spread0.277 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2012
Admission routes1
Has abstractyes

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