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Record W1509579950 · doi:10.1071/rdv17n2ab45

45 ANALYSIS OF DIFFERENTIALLY EXPRESSED PROTEINS IN THE PLACENTA OF SOMATIC CELL CLONED AND ARTIFICIAL INSEMINATION PIG PLACENTA USING PROTEOMICS

2004· article· en· W1509579950 on OpenAlexfundno aff
S.Y. Lee, S.K. Cho, M.R. Park, E.K. Lee, J.H. Kim

Bibliographic record

VenueReproduction Fertility and Development · 2004
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicTransgenic Plants and Applications
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of CanadaOntario Ministry of Agriculture, Food and Rural Affairs
KeywordsTransfectionElectroporationTransgenesisMolecular biologyReproductive technologySomatic cell nuclear transferBiologyCell cultureAndrologyLipofectamineGreen fluorescent proteinRecombinant DNACell biologyGeneGeneticsEmbryoMedicineCryopreservationVector (molecular biology)Embryogenesis

Abstract

fetched live from OpenAlex

Somatic cell cloning has been hampered by biological and technical problems. A major limitation of cloning procedures is the extreme inefficiency of producing healthy offspring for reasons such as sudden intrauterine unexplained death and infant death syndrome. In this study, we analyzed differentially expressed protein profiles in the placenta of somatic cell cloned (SCNT) and artificial insemination (AI; control) pigs by proteomics. Protein expression pattern of placentas was established in the pH range 4–7, IEF cell system, and 7.5–17.5% gradient 2-dimensional polyacrylamide gel electrophoresis. Image analysis following silver staining used the spot and PDQuest analysis system. Peptide mass fingerprinting with matrix assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry and SWISS-PROT database search were utilized to identify proteins. Around 1000 protein spots were recognized by image analysis on each placenta. In SCNT pig placentas, 37 spots were changed compared with those of AI pig placentas. Among them 11 proteins such as serum albumin precursor and annexin A5 showed an increased protein expression level whereas the expression level of 26 other proteins such as aldose reductase and tropomyosin decreased. Annexin A5 and aldose reductase are implicated in the apoptosis process: the former is an apoptotic marker of oxidative stress; on the other hand, the latter is a critical regulator of TNF-a-induced apoptotic signaling in endothelial cells. Also, tropomyosin is implicated in stabilizing cytoskeleton actin filaments. The expression of these proteins was confirmed by western blot and real-time PCR analysis. These results suggest expression of abnormal placental protein and apoptotic-related protein in SCNT pig placentas affects the regulation of placental growth and development. This work was supported in part by a grant program from RDA(Biogreen21) and Cho-A, Republic of Korea.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.282
Threshold uncertainty score0.249

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.251
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2004
Admission routes1
Has abstractyes

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