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Branched‐chain Amino Acid Catabolism is Required for Muscle Cell Differentiation

2015· article· en· W1515376678 on OpenAlexaff
Zameer Dhanani, Kanwar Dhaliwal, Olasunkanmi John Adegoke

Bibliographic record

VenueThe FASEB Journal · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMuscle metabolism and nutrition
Canadian institutionsYork University
Fundersnot available
KeywordsMyogenesisLeucineBranched-chain amino acidCatabolismAmino acidmTORC1MyosinValineBiochemistrySkeletal muscleDownregulation and upregulationAnabolismCellular differentiationIsoleucineMetabolismBiologyChemistryEndocrinologySignal transductionGenePI3K/AKT/mTOR pathway

Abstract

fetched live from OpenAlex

The importance of branched‐chain amino acids (BCAAs) in promoting skeletal muscle anabolism has been well studied. BCAAs isoleucine, leucine, and valine have been shown to have a profound effect on activating anabolic signaling pathways in skeletal muscle. This occurs in part by the upregulation in activity of the mammalian target of rapamycin complex‐1 (mTORC1), resulting in increased protein synthesis. However, the regulation of branched‐chain amino acids during the development of muscle remains yet to be elucidated. Here, we studied BCAA metabolism during a 5‐day differentiation of L6 myoblasts. Although no change in intracellular BCAA concentrations was observed during differentiation, L6 cells cultured in the absence of leucine were severely impaired in their ability to differentiate as expression of myosin heavy chain (MHC) was completed abrogated at day 5. Two enzymes which are critical for BCAA metabolism are the branched‐chain amino transferase‐2 enzyme (BCAT2) and the branched chain α‐keto acid dehydrogenase complex (BCKD). BCAT2 catabolizes BCAAs to their corresponding alpha‐keto acids, which are then irreversibly decarboxylated by the BCKD complex. The abundance of BCAT2 did not change during differentiation, whereas levels of the E1α subunit of BCKD was increased 7x on day 5 compared to day 1 (p<0.05). Finally, when either BCAT2 or BCKDE1α was knocked down in the presence of leucine, myoblast differentiation was abrogated (BCKDE1α RNAi: MHC decreased 4.5x from day 3 to day 5 (p<0.05); BCAT2 RNAi: MHC levels completely abolished). Our findings suggest that BCAA catabolism may be a critical process in facilitating muscle differentiation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.249
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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