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Abnormalities in BDNF/TrkB/PI3K signaling pathways in autism (728.3)

2014· article· en· W1525988910 on OpenAlexaff
Margaret Fahnestock, Chiara Nicolini

Bibliographic record

VenueThe FASEB Journal · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBiotin and Related Studies
Canadian institutionsMcMaster University
Fundersnot available
KeywordsAutismTropomyosin receptor kinase BPI3K/AKT/mTOR pathwayNeuroscienceDendritic spineExcitatory postsynaptic potentialProtein kinase BValproic AcidPsychologyInternal medicineEndocrinologyMedicineBiologySignal transductionReceptorNeurotrophic factorsEpilepsyPsychiatryHippocampal formationCell biologyInhibitory postsynaptic potential

Abstract

fetched live from OpenAlex

Cortical connectivity and spine abnormalities may account for clinical features of autism. BDNF, a key spine regulator, exhibits altered isoform balance in autism. Here, we investigated whether BDNF receptors and their signaling pathways are disrupted in post‐mortem fusiform gyrus from subjects with autism compared to controls and in the valproic acid (VPA)‐induced rat model of autism. Protein levels were examined by Western blot in 11 autism vs 13 control subjects and in lateral temporal neocortices of VPA rats vs controls. Reduced TrkB, PI3K, Akt, mTOR, phospho‐mTOR, p70S6K, eIF4B and PSD‐95 and a trend towards increased truncated TrkB and p75 NTR , but no changes in 4E‐BP1 or eIF4E, were found in autism subjects versus controls. Similar deficits were observed in VPA rats, although total and phospho‐4E‐BP1 were decreased in these rats. These findings suggest imbalances in BDNF/TrkB/PI3K and proBDNF/p75 NTR signaling in autism which could lead to spine defects. Reduced Akt‐mTOR protein and signaling, suggesting spine protein synthesis deficits, were observed in both autism and VPA rats, despite minor differences in down‐regulated signaling cascades. The resulting spine defects might lead to loss of excitatory synapses/decreased PSD‐95 in autism. Reduced excitatory synapses might perturb cortical circuitry, contributing to autism’s cognitive and behavioral deficits.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.218
Teacher spread0.207 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2014
Admission routes1
Has abstractyes

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