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β‐Catenin in the renal stroma regulates apoptosis via Bcl2l1 during kidney development (344.4)

2014· article· en· W1531312845 on OpenAlexaffabout
Felix Boivin, Darren Bridgewater

Bibliographic record

VenueThe FASEB Journal · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRenal and related cancers
Canadian institutionsMcMaster University
Fundersnot available
KeywordsStromal cellMesenchymeStromaKidney developmentCateninCell biologyBiologyCancer researchApoptosisPopulationKidneyEmbryonic stem cellWnt signaling pathwayMedicineEndocrinologyImmunologySignal transductionMesenchymal stem cellGeneImmunohistochemistryGenetics

Abstract

fetched live from OpenAlex

Kidney development is dependent upon reciprocal inductive interactions between epithelium, mesenchyme, and stroma cells. β‐catenin is essential for the formation of mesenchyme derived nephrons and epithelial derived collecting duct system. β‐catenin protein is expressed in medullary, cortical, and capsular stroma in embryonic and mature kidneys. However, its role in the renal stroma is not well understood. We generated mice with ß‐catenin deficiency exclusively in the renal stroma (termed ß‐catLOF‐S). Kidneys from ß‐catLOF‐S demonstrated a paucity of renal capsule and a significant reduction in the stromal cell population (4.55 +/‐ 0.19 stromal cells/mm2 WT vs 2.52 +/‐ 0.26 in ß‐catLOF‐S). Analysis of apoptosis in ß‐catLOF‐S revealed a significant increase in apoptotic stromal cells by E13.5 (0.54 +/‐ 0.03 WT apoptotic cells/mm2 vs 1.19 +/‐ 0.14 in ß‐catLOF‐S). We investigated β‐catenin targets that regulate apoptosis and observed significant reductions in Bcl2l1 mRNA and protein in ß‐catLOF‐S kidneys. We demonstrate β‐catenin forms a novel molecular complex with transcriptional co‐activators TBX5, YAP1, and YES1, and binds to the TBX5 consensus site within the Bcl2l1 promoter. These results suggest β‐catenin controls stromal cell survival via regulation of Bcl2l1 by forming a novel transcriptional complex during kidney development. Grant Funding Source : Supported by NSERC (Natural Sciences and Engineering Research Council of Canada) and KFOC (The Kidne

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.202
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2014
Admission routes2
Has abstractyes

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