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A Rapid New Procedure for Basophil Isolation from Human Peripheral Blood

2008· article· en· W1559128139 on OpenAlexaff
Maureen Fairhurst, Melany Nauer, Allen Eaves, Terry E. Thomas

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldMedicine
TopicFood Allergy and Anaphylaxis Research
Canadian institutionsTerry Fox Research InstituteStemcell Technologies
Fundersnot available
KeywordsBasophilBasophil activationHistamineWhole bloodFlow cytometryChemistryPipetteChromatographyImmunologyMolecular biologyAntibodyLysisCytometryCentrifugationAndrologyImmunoglobulin EMedicineBiologyBiochemistryPharmacology

Abstract

fetched live from OpenAlex

Basophil research has been limited by the difficulty in isolating pure basophils in large numbers. Typically, basophils comprise < 1% of peripheral blood leucocytes in non‐allergic, healthy humans. Current protocols for their isolation are time consuming involving multiple steps and often special equipment. Prolonged manipulation of basophils can lead to undesirable activation and spontaneous histamine release. We describe a rapid (within 1.5 hours) and simple method for the enrichment of basophils from normal blood that does not require Ficoll or lysis steps and yields good purity and recovery. Blood was collected with heparin and red blood cells were removed by HetaSep sedimention. The basophils were then enriched using immunomagnetic, column‐free negative selection (EasySep®). Briefly, unwanted cells were specifically labeled with dextran‐coated magnetic particles using a cocktail of bispecific tetrameric antibody complexes. The labeled cells were then removed using a magnet leaving unlabeled basophils. The entire separation procedure can be automated with a pipetting robot (RoboSep®). Final basophil purity range as assessed by flow cytometry was 92–99% CD45+IgE+ CD123+. May‐Grunwald stained cytospins showed typical morphology and characteristic blue‐black granules. Expression of cell‐surface CD203c was similar between whole blood and enriched basophils. Recovery averaged 49 ± 17 % (n=7).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.009
Threshold uncertainty score0.030

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.003
Insufficient payload (model declined to judge)0.0090.010

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.047
GPT teacher head0.296
Teacher spread0.249 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes1
Has abstractyes

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