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Hydrogen sulfide protects from colitis: a possible role in stabilizing gut microbiota (898.3)

2014· article· en· W1563979368 on OpenAlexaffabout
Jean‐Paul Motta, Kyle L. Flannigan, Terence A. Agbor, Rory W. Blackler, Matt Workentine, Gabriela Silva, André G. Buret, John L. Wallace

Bibliographic record

VenueThe FASEB Journal · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSulfur Compounds in Biology
Canadian institutionsMcMaster UniversityUniversity of Calgary
Fundersnot available
KeywordsCathelicidinColitisMicrobiologyGut floraMucusAntimicrobial peptidesChemistryAntimicrobialInflammatory bowel diseaseMolecular biologyBiologyBiochemistryImmunologyInternal medicineMedicine

Abstract

fetched live from OpenAlex

We hypothesised that hydrogen sulfide (H 2 S) modifies gut microbiota and resolves intestinal inflammation. Rats were gavaged with diallyl disulfide (DADs), and colitis was induced by dinitrobenzene sulfonic acid (DNBS). Colitis severity was assessed by macroscopical, biochemical, and histological analysis. Microbial genetic diversity was performed by denaturing gradient gel electrophoresis. Antimicrobial activity of DADs, NaHS and Na 2 S was evaluated by plating and growth assays. Human intestinal epithelial cell lines were used to assess expression levels of antimicrobial peptides by qRT‐PCR, western‐blotting and immunofluorescence. Administration of DADs increased the expression of cathelicidin, separated the microbiota from the host by a thick mucus barrier, and slightly altered microbial genetic diversity. Treatment of DNBS animals with an inhibitor of H 2 S‐producing enzyme provoked a more severe colitis, enhanced the presence of mucosa‐associated microbial aggregates, and altered mucus barrier. These inflammatory parameters were all reduced when DNBS‐treated animals were given DADs. In vitro, H 2 S‐releasing compounds inhibited the growth of four strains of gut bacteria. Additionally, H 2 S altered the level of expression of cathelicidin and trefoil factor‐3 in human epithelial cells. The findings shed a new light on the therapeutic potential of H 2 S delivery during the course of colitis. Grant Funding Source : Izaak Walton Killam PDF fellowship / University of Calgary Eye's High PDF fellowship

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.228
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2014
Admission routes2
Has abstractyes

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