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Record W158106570 · doi:10.1007/978-1-59745-021-8_6

Genome-Wide Expression Profiling of Neurogenesis in Relation to Cell Cycle Exit

2008· book-chapter· en· W158106570 on OpenAlexaff
P. Roy Walker, Dao Ly, Qing Y. Liu, Brandon Smith, Caroline Sodja, Marilena Ribecco, Marianna Sikorska

Bibliographic record

VenueHumana Press eBooks · 2008
Typebook-chapter
Languageen
FieldNeuroscience
TopicNeurogenesis and neuroplasticity mechanisms
Canadian institutionsInstitute for Biological Sciences
Fundersnot available
KeywordsNeurogenesisCompartment (ship)NeuroscienceBiologyNeuronProcess (computing)Cell cycleProgenitor cellCellCell biologyStem cellComputer scienceGenetics

Abstract

fetched live from OpenAlex

Neurogenesis is the process by which new brain cells are produced either during development or in the adult brain. More specifically, it is “the proliferation of neuronal precursor cells to produce neurons.” Both definitions embody a key role for the cell cycle in the process particularly because the brain is an architecturally complex, multicompartmented tissue and the correct numbers of neurons (and glial cells) must be placed into each compartment. The process is made more complicated by the fact that neurons within each compartment are highly specialized, mandating that the new neurons also have the correct phenotype. Therefore, a mechanistic understanding of neurogenesis requires an understanding of several processes—control of the cell cycle to generate neurons in sufficient numbers, spatial mechanisms that ensure the correct number of cells in each compartment, the differentiation process that transforms a progenitor cell into a neuron, and an explanation of how so many neuronal subtypes can be readily created. Equally important is an understanding of the temporal coordination of these four processes, particularly regarding cell cycle exit. These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.082
GPT teacher head0.251
Teacher spread0.169 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2008
Admission routes1
Has abstractyes

Explore more

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