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Record W1608307015 · doi:10.1002/9781118395264.ch7

Microsporidian Genome Structure and Function

2014· other· en· W1608307015 on OpenAlexaff
Patrick J. Keeling, Naomi M. Fast, Nicolas Corradi

Bibliographic record

Venuenot available
Typeother
Languageen
FieldImmunology and Microbiology
TopicParasitic Infections and Diagnostics
Canadian institutionsUniversity of OttawaUniversity of British ColumbiaCanadian Institute for Advanced Research
Fundersnot available
KeywordsGenomeBiologyMicrosporidiaGeneGeneticsHorizontal gene transferTransposable elementEvolutionary biologyMicrosporidiosis

Abstract

fetched live from OpenAlex

The microsporidia are one group of eukaryotes whose genomes are exceptional and “extreme.” In many ways, microsporidian genomes fit the canonical picture of a nuclear genome: they are composed of multiple linear chromosomes with telomeres. But in other ways, a general view of microsporidian genomes has emerged that more closely resemble those of bacteria: high gene density due to a paucity of introns and transposons, generally short intergenic regions, and few duplicated genes. Within microsporidia, the most extreme reduction in genomes has been found in species belonging to the genus Encephalitozoon. The actual complement of genes encoded in microsporidian genomes is remarkably similar from one species to another, regardless of genome size. Microsporidia acquires specific genes from unrelated lineages through horizontal gene transfer (HGT), and many of these genes have played a central role in microsporidian evolution.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.036
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0250.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.003
GPT teacher head0.200
Teacher spread0.196 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations15
Published2014
Admission routes1
Has abstractyes

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