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Record W1614336078 · doi:10.3233/cbm-2009-0134

Positive identification of CA215 pan cancer biomarker from serum specimens of cancer patients

2009· article· en· W1614336078 on OpenAlexafffund
Gregory Lee, Bixia Ge, Teng-Kai Huang, Gary Zheng, Jiantao Duan, Ida Hsiao Yun Wang

Bibliographic record

VenueCancer Biomarkers · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGlycosylation and Glycoproteins Research
Canadian institutionsUniversity of British Columbia
FundersNational Research Council CanadaNatural Sciences and Engineering Research Council of Canada
KeywordsCancerBiomarkerMedicineIdentification (biology)OncologyInternal medicineCancer researchBiologyGenetics

Abstract

fetched live from OpenAlex

BACKGROUND: To evaluate the clinical utility of CA215 as a pan cancer biomarker, serum levels of CA215 were determined with clinically defined serum specimens from over 500 cancer patients and compared with results obtained by other nine established cancer markers. The molecular nature of this cancer-associated antigen from selected patients' sera was determined. METHODS: By using improved immunoassays, serum levels of CA215 and other known biomarkers were determined for respective positive detection rates. The molecular size of CA215 from cancer patients was determined by Western blot assay. RESULTS: By using 0.1 AU/ml as the normal cut-off value, the positive rates of CA215 for different cancers were shown to be 52% (lung), 74% (liver), 44% (colon), 61% (esophagus), 60% (stomach), 59% (ovary), 40% (prostate), 71% (breast), 38% (kidney), 41% (pancreas), 51% (cervix), and 83% (lymphoma), respectively. Other cancer markers including AFP, CEA, CA125, CA19-9, CA15-3, Cyfra21-1, Ferritin, beta(2) microglobulin and PSA were also parallelly compared. A combination of CA215 with other tissue-associated cancer markers generally resulted in much higher cancer detection rates. CA215 detected from cancer patients was confirmed to be human immunoglobulins that contain common RP215-specific carbohydrate-associated epitope. CONCLUSION: Through clinical evaluations of serum specimens of various cancer patients, CA215 was confirmed to be human cancer cell-derived immunoglobulins. CA215 is apparently comparable to or better than other known biomarkers for the positive detection and monitoring of many types of human cancers.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.419
Threshold uncertainty score0.702

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.312
Teacher spread0.299 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations29
Published2009
Admission routes2
Has abstractyes

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