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Record W1644159990

An Examination of Leaf Morphogenesis In The Moss, Physcomitrella Patens

2011· dissertation· en· W1644159990 on OpenAlexaff
Elizabeth I. Barker

Bibliographic record

VenueoURspace (University of Regina) · 2011
Typedissertation
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Molecular Biology Research
Canadian institutionsUniversity of Regina
Fundersnot available
KeywordsPhyscomitrella patensMossMorphogenesisBotanyBiology
DOInot available

Abstract

fetched live from OpenAlex

Physcomitrella patens is a simple model plant belonging to the bryophytes, which diverged from the tracheophytes approximately 500 million years ago. The leaves of the moss are similar in form to vascular plant leaves although leaves evolved independently in the bryophyte and tracheophyte lineages. Close examination of the morphology of Physcomitrella leaves and investigation of the morphogenetic processes that result in the leaf form and of the hormonal and genetic regulation of those processes will elucidate the evolutionary trajectory of moss leaves. Photomicroscopy and measurement of moss leaves were performed to provide detailed descriptions of leaves in strains of Physcomitrella that exhibited normal and aberrant morphology. Low concentrations of two major phytohormones, auxins and cytokinins, were applied to growing moss cultures to investigate their effects on leaf morphogenesis. A bioinformatic analysis of homologues of vascular plant genes that are involved in leaf development was performed to identify candidate genes that may have been co-opted for regulation of leaf morphogenesis during the early course of plant evolution. The transition from the basal leaf form to the adult form is gradual for all of the heteroblastic features of Physcomitrella leaves with the possible exception of the midrib. Low concentrations of exogenous auxin and cytokinin stimulate cell expansion and cell divisions respectively and auxin may be a key regulator of leaf heteroblasty. Homologues of almost all tracheophyte genes that are known to be involved in leaf morphogenesis are present in the Physcomitrella genome. However, few of the ii Physcomitrella homologues exhibit both a high degree of sequence similarity to the vascular plant genes and high levels of expression in leaves. Of these, class I and class II homeodomain-leucine zipper genes are predicted to play key roles in leaf development in the moss. Other genes may have been co-opted to regulate the processes of cell division, cell expansion and adaxialization/abaxialization of the midrib in bryophyte leaves. Preliminary models of auxin-cytokinin activity and of genetic and hormonal regulation of leaf morphogenetic processes in Physcomitrella provide testable hypotheses for further investigation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.915
Threshold uncertainty score0.781

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.216
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2011
Admission routes1
Has abstractyes

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