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Translocator protein 2 (TSPO2), a new family of proteins involved in cholesterol redistribution in erythropoiesis

2009· article· en· W171590421 on OpenAlexaff
Jinjiang Fan, Vassilios Papadopoulos

Bibliographic record

VenueThe FASEB Journal · 2009
Typearticle
Languageen
FieldMedicine
TopicDrug Transport and Resistance Mechanisms
Canadian institutionsMcGill University Health Centre
Fundersnot available
KeywordsTranslocator proteinErythropoiesisBiologyGeneEctopic expressionCell biologySaccharomyces cerevisiaeBiochemistry

Abstract

fetched live from OpenAlex

Translocator protein (18‐kDa; TSPO) is a highly conserved cholesterol‐ and drug‐binding protein. Analysis of Tspo ‐like sequences from different organisms revealed the presence of evolutionary conserved genes which arose by gene duplications before the divergence of avians and mammals. This new family of genes was named Tspo2 and found to be under strong purifying selection, suggesting that it serves a conserved biological function. The predicted cholesterol‐binding motif at the C‐terminus of TSPO was present in TSPO2, suggesting a role in cholesterol trafficking and/or targeting. In contrast to the mitochondrial TSPO, TSPO2 was found in nuclear and ER membranes. Heterologous expression of TSPO2 in Saccharomyces cerevisiae demonstrated that TSPO2 indeed binds cholesterol with high affinity. However, TSPO2 lost the TSPO drug binding ability. Spatial and temporal distribution of Tspo2 mRNA in the mouse demonstrated its presence in hematopoetic tissues and expression in an erythroid cell type‐specific manner. Overexpression of Tspo2 in erythroid cells resulted in the redistribution of the intracellular free cholesterol which has been linked to the expulsion of the nucleus from erythroblasts leading to erythrocyte maturation. These data suggest that the identified gene expansion in Tspo family supports a specialized function of the TSPO2 in erythropoiesis of endothermic animals, including humans.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.247
Teacher spread0.231 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2009
Admission routes1
Has abstractyes

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