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Regulation of T cell development by the transcription factor HEBAlt (82.1)

2007· article· en· W175749961 on OpenAlexaff
Michele K. Anderson, Duncheng Wang, Carol L. Claus, Marsela Braunstein, G. Vaccarelli

Bibliographic record

VenueThe Journal of Immunology · 2007
Typearticle
Languageen
FieldImmunology and Microbiology
TopicT-cell and B-cell Immunology
Canadian institutionsUniversity of TorontoSunnybrook Health Science Centre
Fundersnot available
KeywordsTranscription factorBiologyT cellCD8Cell biologyLineage (genetic)Cell fate determinationEctopic expressionDownregulation and upregulationRepressorNotch signaling pathwayGenePsychological repressionGeneticsGene expressionSignal transductionImmune system

Abstract

fetched live from OpenAlex

Abstract The transcription factor HEBAlt is derived from the HEB gene locus, which also encodes the E2A-related factor HEBCan (Can=canonical). HEBAlt is expressed in early lymphocyte precursors. HEBAlt is synergistically upregulated in T cell precursors by Delta-Notch signaling and HEBCan activity, and ectopic expression of HEBAlt in uncommitted precursors enhances entry into the T cell lineage. By contrast, HEBAlt is only expressed in committed B cell precursors, and expression prior to commitment blocks B cell development. A role for HEBAlt in the repression of CD8alpha transcription at the pro-T cell stage of development is suggested by loss of CD8 in the presence of HEBAlt, and upregulation of CD8 in pro-T cells by an HEBAlt-engrailed repressor construct. HEBAlt can also influence the fate choice between the gamma-delta T cell lineage and the alpha-beta T cell lineage. These results suggest that HEBAlt is important in multiple aspects of early T cell development, including locking in the T/B lineage choice downstream of Notch signaling, repressing T cell-specific genes poised for expression past TCRbeta selection, and influencing an early T cell lineage decision.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.216
Teacher spread0.203 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes1
Has abstractyes

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