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Transcriptional evidence for failed reinnervation in aging muscle

2015· article· en· W1762402898 on OpenAlexaff
Sudhakar Aare, T Gove, M Vuda, Russell T. Hepple

Bibliographic record

VenueThe FASEB Journal · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMuscle Physiology and Disorders
Canadian institutionsMcGill University
Fundersnot available
KeywordsReinnervationDenervationAgrinNeuromuscular junctionBiologyMuscle atrophyAtrophyInternal medicineEndocrinologySarcopeniaSkeletal muscleAnatomyAcetylcholine receptorNeuroscienceMedicineReceptor

Abstract

fetched live from OpenAlex

Muscle displays a marked accumulation of denervated myofibers at ages associated with an acceleration of atrophy and weakness. As muscle undergoes repeating cycles of denervation and reinnervation throughout adulthood, we hypothesize that the accumulation of denervated myofibers in advanced age is due to failed reinnervation. To address this issue, we quantified neuromuscular junction (NMJ) associated genes including five AChR subunits, MuSK, Rapsyn, Agrin, Lrp4 and APC in three different model systems. Firstly, we examined vastus lateralis (VL) muscle from young adult (YA) and very old (VO) Fisher 344xBrown Norway F1‐hybrid rats. Secondly, we examined biopsies from human VL in a young physically active group (23.7±2.7), an old active group (71.2±4.9), an old inactive group (64.8±3.1) and a very old inactive group (82.5±4.8). Lastly, we examined Extensor digitorum longus(EDL) & Tibialis anterior (TA) muscle from wild type and neurotrypsin over‐expressing (Sarco) mice as a model of unstable NMJs secondary to reduced MuSK activation. Interestingly, transcripts of MuSK (21 fold), Rapsyn, Agrin and AChR subunits α (68 fold), β, and the fetal isoform γ (47 fold) were upregulated in very old muscle of rat. In contrast, only Musk, Agrin and Rapsyn were increased in aging human muscle of very old inactive group compared with a young active group, consistent with the milder denervation phenotype by morphology. In contrast, in Sarco mice these NMJ transcripts were largely preserved despite a muscle atrophy phenotype and small angular fibers characteristic of long‐term denervation, which were frequent in VO rat and very old inactive human muscle, were rare in Sarco mice suggesting a high fidelity of reinnervation. We conclude that the dramatic changes in the NMJ transcriptional profile in aging muscle is indicative of a failed reinnervation response.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.077
GPT teacher head0.314
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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