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Record W1763855861 · doi:10.11646/phytotaxa.18.1.1

One hundred new species of lichenized fungi: a signature of undiscovered global diversity

2011· article· en· W1763855861 on OpenAlexaff
H. Thorsten Lumbsch, Teuvo Ahtı, Susanne Altermann, Guillermo Amo de Paz, André Aptroot, Ulf Arup, Paulina A. Bawingan, Michel Navarro Benatti, Liliana Betancourt, Curtis R. Björk, Kansri Boonpragob, Martin D. Brand, Frank Bungartz, Marcela E. S. Cáceres, Mehmet Candan, J. L. Chaves, Philippe Clerc, R. H. Common, B. J. Coppins, Ana Crespo, Manuela Dal Forno, Pradeep K. Divakar, Melizar V. Duya, John A. Elix, Arve Elvebakk, Johnathon D. Fankhauser, Edit Farkas, Laura Ferraro, E. Fischer, D. J. Galloway, Ester Gaya, M. Giralt, Trevor Goward, Martín Grube, Josef Hafellner, Jose E. Hernandez, Mari Lúcia Campos, Klaus Kalb, Ingvar Kärnefelt, Gintaras Kantvilas, Dorothee Killmann, Paul M. Kirika, Kerry Knudsen, Harald Komposch, S. Y. Kondratyuk, James D. Lawrey, Atílio J. Mangold, Marcelo Pinto Marcelli, Bruce McCune, María Inés Messuti, Andrea Michlig, Bibiana Moncada, Alivereti Naikatini, Matthew P. Nelsen, Dag Olav Øvstedal, Zdeněk Palice, Khwanruan Papong, Sittiporn Parnmen, Sergio Pérez‐Ortega, Christian Printzen, Víctor Rico, Eimy Rivas Plata, Javier Robayo, Dania Rosabal, Ulrike Ruprecht, Nina S. Allen, Leopoldo G. Sancho, Luciana Santos De Jesus, Thalita Vieira, Matthias Schultz, M. R. D. Seaward, Emmanuël Sérusiaux, Imke Schmitt, Harrie J. M. Sipman, Mohammad Sohrabi, Ulrik Søchting, Majbrit Zeuthen Søgaard, L.B. Sparrius, Albert Spielmann, Toby Spribille, JUTARAT SUTJARITTURAKAN, A. Thammathaworn, Arne Thell, Göran Thor, Holger Thüs, Einar Timdal, Camille Truong, Roman Türk, LOENGRIN UMAñA TENORIO, Pieter van den Boom, Mercedes Rebuelta, Mats Wedin, Susan Will‐Wolf, Volkmar Wirth, Nora Wirtz, Rebecca Yahr, Kumelachew Yeshitela, Frauke Ziemmeck, Thomas M. Wheeler, Robert Lücking

Bibliographic record

VenuePhytotaxa · 2011
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicLichen and fungal ecology
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsBiologyBotanyLichenTaxonomy (biology)

Abstract

fetched live from OpenAlex

The number of undescribed species of lichenized fungi has been estimated at roughly 10,000. Describing and cataloging these would take the existing number of taxonomists several decades; however, the support for taxonomy is in decline worldwide. In this paper we emphasize the dire need for taxonomic expertise in lichenology. We bring together 103 colleagues from institutions worldwide to describe a total of 100 new species of lichenized fungi, representing a wide taxonomic and geographic range. The newly described species are: Acarospora flavisparsa, A. janae, Aderkomyces thailandicus, Amandinea maritima, Ampliotrema cocosense, Anomomorpha lecanorina, A. tuberculata, Aspicilia mansourii, Bacidina sorediata, Badimia multiseptata, B. vezdana, Biatora epirotica, Buellia sulphurica, Bunodophoron pinnatum, Byssoloma spinulosum, Calopadia cinereopruinosa, C. editae, Caloplaca brownlieae, C. decipioides, C. digitaurea, C. magnussoniana, C. mereschkowskiana, C. yorkensis, Calvitimela uniseptata, Chapsa microspora, C. psoromica, C. rubropulveracea, C. thallotrema, Chiodecton pustuliferum, Cladonia mongkolsukii, Clypeopyrenis porinoides, Coccocarpia delicatula, Coenogonium flammeum, Cresponea ancistrosporelloides, Crocynia microphyllina, Dictyonema hernandezii, D. hirsutum, Diorygma microsporum, D. sticticum, Echinoplaca pernambucensis, E. schizidiifera, Eremithallus marusae, Everniastrum constictovexans, Fellhanera borbonica, Fibrillithecis sprucei, Fissurina astroisidiata, F. nigrolabiata, F. subcomparimuralis, Graphis caribica, G. cerradensis, G. itatiaiensis, G. marusa, Gyalideopsis chicaque, Gyrotrema papillatum, Harpidium gavilaniae, Hypogymnia amplexa, Hypotrachyna guatemalensis, H. indica, H. lueckingii, H. paracitrella, H. paraphyscioides, H. parasinuosa, Icmadophila eucalypti, Krogia microphylla, Lecanora mugambii, L. printzenii, L. xanthoplumosella, Lecidea lygommella, Lecidella greenii, Lempholemma corticola, Lepraria sekikaica, Lobariella sipmanii, Megalospora austropacifica, M. galapagoensis, Menegazzia endocrocea, Myriotrema endoflavescens, Ocellularia albobullata, O. vizcayensis, Ochrolechia insularis, Opegrapha viridipruinosa, Pannaria phyllidiata, Parmelia asiatica, Pertusaria conspersa, Phlyctis psoromica, Placopsis imshaugii, Platismatia wheeleri, Porina huainamdungensis, Ramalina hyrcana, R. stoffersii, Relicina colombiana, Rhizocarpon diploschistidina, Sticta venosa, Sagenidiopsis isidiata, Tapellaria albomarginata, Thelotrema fijiense, Tricharia nigriuncinata, Usnea galapagona, U. pallidocarpa, Verrucaria rhizicola, and Xanthomendoza rosmarieae. In addition, three new combinations are proposed: Fibrillithecis dehiscens, Lobariella botryoides, and Lobariella pallida.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0030.003
Science and technology studies0.0010.001
Scholarly communication0.0020.002
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.056
GPT teacher head0.207
Teacher spread0.151 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations237
Published2011
Admission routes1
Has abstractyes

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