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Metabolic control points in cancer (85.3)

2014· article· en· W1820751581 on OpenAlexaff
Russell G. Jones, Brandon Faubert, Fanny Dupuy, Said Izreig, Gino Boily, Takla Griss, Bożena Samborska, Peter M. Siegel

Bibliographic record

VenueThe FASEB Journal · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer, Hypoxia, and Metabolism
Canadian institutionsMcGill UniversityMcGill University Health Centre
Fundersnot available
KeywordsAMPKAnaerobic glycolysisCancer cellWarburg effectCell biologyProtein kinase AGlycolysisMetabolic pathwayCell growthBiologyCell metabolismKinaseSignal transductionMetabolismCellCancer researchCancerBiochemistryGenetics

Abstract

fetched live from OpenAlex

All cells must manage their energetic resources to survive. This is particularly true for cancer cells, which initiate changes in their cellular metabolism as they transition from a normal to a cancerous state. Tumor cells must engage pathways of cellular metabolism to generate the energy and biosynthetic intermediates required to support increased cell growth and division. In addition, for growing tumours, overcoming metabolic stress induced by nutrient limitation and/or hypoxia is a critical step for solid tumour growth. It is now appreciated that many of the predominant mutations observed in cancer also influence tumor metabolism as part of their mode of action. Here I discuss the role that cellular energy sensors ‐ notably the Liver Kinase‐B1 (LKB1) and the AMP‐activated protein kinase (AMPK) ‐ play in regulating tumor metabolism and adaptation to metabolic stress. We have found that the LKB1‐AMPK pathway negatively regulates aerobic glycolysis (the “Warburg effect”) in cancer cells, and that disruption of this pathway promotes a metabolic shift to aerobic glycolysis and supports increased cell growth. This metabolic shift is mediated by the hypoxia‐inducible factor‐1α (HIF‐1α), and silencing HIF‐1α reverses the biosynthetic and proliferative advantages conferred by reduced LKB1‐AMPK signaling. Finally, I will present evidence that AMPK activity is dynamically regulated in tumors to enhance pro‐growth metabolism, but that this pathway is required to maintain tumor cell viability in response to stress. Finally, I will discuss whether metabolic checkpoints serve “suppressive” or “supportive” roles in cancer development and/or progression. This work was supported by grants from the CIHR (MOP‐93799) and CCSRI (700586).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.033
Threshold uncertainty score0.110

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0020.001
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0330.016

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.252
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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