MétaCan
Menu
Back to cohort
Record W1836695669 · doi:10.1111/jph.12444

Molecular Characterization of Divergent Strawberry Mild Yellow Edge Virus Isolates from Eastern Canada

2015· article· en· W1836695669 on OpenAlex
Basdeo Bhagwat, Virginia Dickison, Su Li, Mike Bernardy, Paul A. Wiersma, Xianzhou Nie, Yu Xiang

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueJournal of Phytopathology · 2015
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Virus Research Studies
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsBiologyPhylogenetic treeNova scotiaVirusStrain (injury)PhylogeneticsGeneticsRecombinationGenomeVirologyGene

Abstract

fetched live from OpenAlex

Abstract The complete genome sequences of four new isolates of strawberry mild yellow edge virus ( SMYEV ) were determined and analysed. The isolates, designated as AB 41‐01, AB 41‐02, NB 1165 and NS 26, were found from strawberry fields showing strawberry decline symptoms in eastern Canada. AB 41‐01 and AB 41‐02 were from a single‐plant sample originating from Prince Edward Island, while NB 1165 came from New Brunswick and NS 26 from Nova Scotia. Nucleotide sequence identities are 95.8% between AB 41‐01 and NB 1165, 99.6% between AB 41‐02 and NS 26, and 84% between AB 41‐01/ NB 1165 and AB 41‐02/ NS 26. The four isolates share nucleotide sequence identities of 83.5–89.9% to two previously identified SMYEV isolates, namely MY 18 and D7. Phylogenetic analysis indicates that the four Canadian isolates represented two new SMYEV strain types and the strain divergences were not likely from recombination events among all presently known SMYEV isolates.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.518
Threshold uncertainty score0.984

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.240
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it