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Shp1 regulates T cell homeostasis by antagonizing IL-4 signalling (P1312)

2013· article· en· W183961741 on OpenAlexaff
Dylan Johnson, Lily Pao, Salim Dhanji, Kiichi Murakami, Ben Neel, Pamela S. Ohashi

Bibliographic record

VenueThe Journal of Immunology · 2013
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune Cell Function and Interaction
Canadian institutionsPrincess Margaret Cancer CentreUniversity of TorontoOntario Institute for Cancer Research
Fundersnot available
KeywordsT cellConditional gene knockoutProtein tyrosine phosphataseCell biologyBiologyHaematopoiesisInflammationRegulatorPhenotypeSignal transductionImmunologyImmune systemStem cellGenetics

Abstract

fetched live from OpenAlex

Abstract The tyrosine phosphatase Shp1 is expressed ubiquitously in hematopoietic cells and is generally viewed as a negative regulator. Null mutations in Ptpn6, which encodes Shp1, result in the motheaten phenotype, characterized by widespread inflammation that causes death by 3-4 weeks of age. Previous studies of motheaten mice identified Shp1 as a negative regulator of TCR signaling, but the severe inflammation in these mice could have confounded our understanding of Shp1 function in T cell biology. To define the T cell intrinsic role of Shp1, we have characterized T cell-specific conditional knockout mice. Surprisingly, we detect no changes in TCR responsiveness in Shp1-deficient thymocytes or peripheral T cells. Instead, T cell Shp1 KO mice are enriched for memory-phenotype T-cells that express elevated levels of CD44 in the periphery. In addition, activated Shp1-deficient CD4+ T cells skew to Th2 and produce elevated levels of IL-4. Following IL-4 stimulation, Stat 6 activation is sustained in Shp1 deficient T-cells, leading to enhanced IL-4 production. Elimination of IL-4, through in vivo administration of a neutralizing antibody or by crossing to IL-4 KO mice, results in marked reduction of the excessive memory-like population in T cell specific Shp1 KO mice. Therefore, Shp1 is an essential negative regulator of IL-4 signaling in and is critical for the maintainance of T cell homeostasis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.203
Teacher spread0.194 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2013
Admission routes1
Has abstractyes

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