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Record W1884029622 · doi:10.1111/jbi.12543

Geographical origins, migration patterns and refugia of <i>Sibbaldia procumbens</i>, an arctic–alpine plant with a fragmented range

2015· article· en· W1884029622 on OpenAlexafffund
Geraldine A. Allen, Kendrick L. Marr, Laurie J. McCormick, Richard J. Hebda

Bibliographic record

VenueJournal of Biogeography · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsRoyal British Columbia MuseumUniversity of Victoria
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsBiological dispersalRange (aeronautics)BeringiaDisjunctEcologyRefugium (fishkeeping)ArcticBiogeographyGeographyDisjunct distributionBiologyPleistocenePhylogeographyLatitudePhylogenetic treePopulationHabitatPaleontology

Abstract

fetched live from OpenAlex

Abstract Aim Many plants, especially at high latitudes, have both widespread and highly discontinuous geographical distributions. To increase understanding of how such patterns originate, we examine genetic patterns in the arctic–alpine plant Sibbaldia procumbens . We evaluate the contributions of refugia and the role of long‐distance dispersal in shaping the current range of this species. Location Northern Hemisphere, especially North America. Methods We sampled Sibbaldia from 176 localities, including 168 for S. pro‐cumbens . We analysed sequence variation in three plastid DNA non‐coding regions (the atp I– atp H and trn L– trn F intergenic spacers and the trn L intron), performed Bayesian phylogenetic analyses and statistical parsimony analyses on the combined sequences, and analysed the geographical patterns of haplotype distribution and genetic diversity using data from all populations. Results Sibbaldia procumbens probably originated in the mountains of South and East Asia. We identified highly distinct clades in Europe and North America, which overlapped on oceanic islands of the North Atlantic indicating long‐distance dispersal capability. The North American clade included two lineages, one in California and the other widely distributed across the continent and North Atlantic. Haplotype diversity in the latter lineage was markedly higher to the south, suggesting mid–late Pleistocene southward displacement of North American populations with subsequent migration northwards into previously glaciated regions. In Europe, disjunct geographical regions generally harboured distinct haplotypes. Main conclusions Multiple Pleistocene refugia for S. procumbens occurred in both North America and Europe. North American refugia existed in California and in the southern Rocky Mountains, but in contrast with most widespread arctic–alpine species we found no evidence for a Beringian refugium. Cryptic refugia may have existed within the Cordilleran Ice Sheet. Episodes of range expansion and contraction and long‐distance dispersal have all contributed to the genetic structure and widespread but fragmented distribution of this species.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.062
Threshold uncertainty score0.365

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.222
Teacher spread0.212 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations32
Published2015
Admission routes2
Has abstractyes

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