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Record W1889471882 · doi:10.1128/9781555815936.ch28

Recent Developments in Rapid Detection Methods

2014· book-chapter· en· W1889471882 on OpenAlexaff
Lawrence Goodridge, Mansel W. Griffiths

Bibliographic record

VenueASM Press eBooks · 2014
Typebook-chapter
Languageen
FieldEngineering
TopicBiosensors and Analytical Detection
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsNucleic acidIsolation (microbiology)AptamerBiologyGold standard (test)MicroorganismComputational biologyMicrobiologyMolecular biologyBacteriaBiochemistryMedicine

Abstract

fetched live from OpenAlex

The continued presence of pathogenic microorganisms and their toxins in food and drinking water has necessitated the ongoing need for newer, more sensitive and robust analytical systems capable of rapid detection of these contaminants in complex samples. The ideal detection method should be capable of rapidly detecting and confirming the presence of food-borne pathogenic microorganisms directly from complex samples with no false-positive or false-negative results. Rapid detection methods including immunological detection, cell/tissue-based assays and nucleic acid-based assays have been discussed in this chapter. Conventional culture techniques continue to be the gold standard for the isolation, detection, and identification of target pathogens. These methods increase detection times by hours to days, causing preliminary test results to be delayed. These assays are defined as affinity, cell/tissue, and nucleic acid technologies. Antibody-based detection systems are still considered to be the gold standard of affinity-based testing methods. Aptamers offer several advantages over the use of antibodies in the identification of food-borne microorganisms and toxins. Any microorganism that contains DNA or RNA can be detected using nucleic acid-based assays, but a limitation of these diagnostics is their inability to detect protein-based agents of disease, such as toxins or prions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Other design · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.994
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.259
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designOther design
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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