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Record W1913418366 · doi:10.1109/cibcb.2015.7300293

Classification via correlation-based feature grouping

2015· article· en· W1913418366 on OpenAlexaff
Mina Maleki, Luis Rueda

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMachine Learning in Bioinformatics
Canadian institutionsUniversity of Windsor
Fundersnot available
KeywordsFeature selectionFeature (linguistics)Pattern recognition (psychology)Support vector machineArtificial intelligenceComputer scienceCorrelationk-nearest neighbors algorithmFeature vectorFilter (signal processing)Set (abstract data type)Data miningMathematics

Abstract

fetched live from OpenAlex

Employing the most relevant and discriminating features is very important to achieve a successful classification with low computational cost. Although, different feature selection methods have been recently developed for this purpose, feature grouping can deal with high dimensional sparse feature vectors more effectively, yielding better interpretation of the data. In this paper, a correlation-based feature grouping (CFG) method is proposed. First, the features are grouped based on the variety of their correlation scores, and then, a new representative feature vector is generated for each group by combining its features. To investigate the strength of CFG method, two filter methods of χ2and correlation are employed for feature selection, while classification is performed using a support vector machine (SVM) and k-Nearest Neighbor (k-NN). The empirical study on two datasets of protein-protein interactions (PPIs) and breast cancer verifies that the idea of employing feature grouping is more efficient than employing feature selection in identifying a set of features that exhibit high classification accuracy. In addition, a CFG diagram is introduced in this paper, which is used to visualize the groups and their corresponding features found by the proposed method.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.005
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.005
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0050.005
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.263
Teacher spread0.247 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2015
Admission routes1
Has abstractyes

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Same topicMachine Learning in BioinformaticsFrench-language works237,207