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Skeletal muscle impairment and proteomic profil in human pulmonary arterial hypertension

2014· article· en· W1953806277 on OpenAlexaff
François Potus, Aude Pflieger, Simon Malenfant, Sébastien Bonnet, Steeve Provencher

Bibliographic record

VenueEuropean Respiratory Journal · 2014
Typearticle
Languageen
FieldMedicine
TopicPulmonary Hypertension Research and Treatments
Canadian institutionsCentre de Recherche Industrielle du Québec
Fundersnot available
KeywordsMedicineSkeletal muscleInternal medicineCitrate synthaseMuscle biopsyPulmonary hypertensionMyogenesisVentricleEndocrinologyMitochondrionOxidative phosphorylationExercise intoleranceBiopsyMetabolismPathologyCardiologyBioinformaticsBiochemistryBiologyHeart failureEnzyme

Abstract

fetched live from OpenAlex

Introduction: the most important symptom of pulmonary arterial hypertension (PAH) is exercise intolerance leading poor quality of life. Numerous observations suggest that exercise limitation in PAH is not solely due to pulmonary hemodynamic impairment, but that other determinants such as skeletal muscle abnormalities are involved. In order to better understand the origins of exercise limitation in PAH, we studied the proteomic signature of skeletal muscle impairment in patients with idiopathic PAH (iPAH). Methods and results: Muscle proteins from 4 iPAH patients and 4 sex and age matched controls were extracted following quadriceps muscle biopsy. Fractioned peptides were then tagged using isobaric Tags for Relative and Absolute Quantitation (iTRAQ, ABsciex) specific for each patient. Over 900 proteins were identified using iTRAQ analysis, among them, 9 were under-expressed and 7 were over-expressed in all iPAH patient quadriceps. In silico analysis revealed that more than 75% of the under-expressed proteins are involved in oxidative metabolism and most other highlighted proteins play a role in myogenesis. These findings were structurally associated with decreased mitochondrial density (citrate synthase assay) and impaired mitochondrial structure measured by electronic microscopy, while muscle fibers distribution was unchanged. Functionally, all these abnormalities resulted in decreases in oxidative metabolism Conclusions: For the first time in humans, we provide evidences that, as in lungs and the right ventricle, the impaired mitochondrial/metabolism function is also present in skeletal muscle suggesting that PAH might be considered as a global mitochondrial/metabolic disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.274
Teacher spread0.245 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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