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Record W1964823755 · doi:10.11646/phytotaxa.204.2.2

Luzula effusa var. chinensis (Juncaceae): the first record for the wood-rush genus in Vietnam

2015· article· en· W1964823755 on OpenAlexaff
Bruce A. Ford, Anh Tai Vu, Julian R. Starr

Bibliographic record

VenuePhytotaxa · 2015
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicBotany, Ecology, and Taxonomy Studies
Canadian institutionsUniversity of OttawaUniversity of Manitoba
FundersNational Geographic Society
KeywordsBiologyBotany

Abstract

fetched live from OpenAlex

Mount Fansipan, situated in the Hoang Lien Son Range, supports a rich subtropical and temperate flora of over 1700 species, including 25% of Vietnam’s endemic plant taxa (Nguyen & Harder 1996, Sterling et al. 2006). At elevations above 2000 m, Mount Fansipan contains numerous temperate genera including Acer Linnaeus (19 spp., Sapindaceae Jussieu), Alnus Miller (A. nepalensis, Betulaceae Gray), Betula Linnaeus (B. alnoides Buchanan-Hamilton, Betulaceae), Carex Linnaeus (36 spp., Cyperaceae Jussieu), Clematis Linnaeus (9 spp., Ranunculaceae Jussieu), Lithocarpus Blume (13 spp., Fagaceae Dumortier), Quercus Linnaeus (9 spp., Fagaceae), Rhododendron Linnaeus (40 spp., Ericaceae Jussieu), Rubus Linnaeus (36 spp., Rosaceae Jussieu), Tsuga Carrière (T. dumosa Eichler, Pinaceae Sprengel ex F. Rudolphi), Ulmus Linnaeus (U. lancifolia Roxburgh, Ulmaceae Mirbel), Vaccinium Linnaeus (12 spp., Ericaceae), and Viola Linnaeus (12 spp., Violaceae Batsch) (Vietnam Plant Data Center 2015, Nguyen & Harder 1996) with many of these genera being both species-rich and locally common (Nguyen & Harder 1996, pers. obs.). In April 2012, a collection of a specimen, representing the temperate genus Luzula de Candolle (1805: 158), was made while conducting botanical studies on the Carex flora of Mount Fansipan, Lao Cai Province, Vietnam, which is about 30 km south of the border with Yunnan Province, China. While the specimen was immediately recognized as a Luzula, a new genus to the flora of Vietnam (Vietnam Plant Data Center 2015), it was not until our collection was identified using the keys in Wu & Clements (2000) and Kirschner (2002) that it was determined to be Luzula effusa Buchenau (1879: 88) (Figs. 1, 2). A Basic Alignment Search Tool (BLAST) search of an internal transcribed spacer region (ITS1+5.8S+ITS2) sequence obtained from our specimen (KM612280) showed a 100% match with an existing sequence for L. effusa var. chinensis (Brown 1903: 161) Wu (1992: 92) (AY727778.1, see Drábková & Vlcek 2010) in GenBank (National Center for Biotechnology Information 2014), supporting our identification based on morphology (Table 1). Eighteen other Luzula accessions, representing species placed in two different subgenera and four different sections, were found to have 100% coverage and 99% identity with the sequence from our specimen (National Center for Biotechnology Information 2014) (Table 1). In all cases, these sequences came from taxa that occur in regions that are more geographically disparate from Vietnam than the previously known closest location for L. effusa (see below). These taxa are also morphologically dissimilar to our specimen (see text below and Table 1).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.028
Threshold uncertainty score0.057

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0010.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.044
GPT teacher head0.236
Teacher spread0.192 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2015
Admission routes1
Has abstractyes

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